Science Explorer Back to mapMap
Discussion
Institution · Applied Genetic Technologies (United States)

Most cited papers from Applied Genetic Technologies (United States)

Applied Genetic Technologies (United States)

What are the most cited papers from Applied Genetic Technologies (United States)?

The most cited paper from Applied Genetic Technologies (United States) is "Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition)" (Daniel J. Klionsky et al., 2016), with 6,023 citations. Next come "A reference genome for common bean and genome-wide analysis of dual domestications" (1,396) and "Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement" (1,294).

Showing 50 of 60 papers. Every paper with more than 166 citations is listed.

Most cited papers, sortable by citations and release date
#Paper
1 Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition) Daniel J. Klionsky et al. · Autophagy Open access2,467 authors 2 Jan 2016 6,023
2 A reference genome for common bean and genome-wide analysis of dual domestications Jeremy Schmutz et al. · Nature Genetics Open access 8 Jun 2014 1,396
3 Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement Rajeev Kumar Varshney et al. · Nature Biotechnology Open access 27 Jan 2013 1,294
4 The Origins of Genome Architecture Hussein Abdel‐Haleem · Journal of Heredity 19 Jul 2007 1,157
5 Breeding crops to feed 10 billion Lee Thomas Hickey, Amber N. Hafeez, Hannah Robinson et al. · Nature Biotechnology 17 Jun 2019 1,104
6 The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut David J. Bertioli et al. · Nature Genetics Open access 22 Feb 2016 1,079
7 Major Impacts of Widespread Structural Variation on Gene Expression and Crop Improvement in Tomato Michael Alonge et al. · Cell Open access 17 Jun 2020 922
8 The Amborella Genome and the Evolution of Flowering Plants Amborella Genome Project et al. · Science Open access149 authors 19 Dec 2013 917
9 The genome sequence of segmental allotetraploid peanut Arachis hypogaea David J. Bertioli et al. · Nature Genetics Open access May 2019 850
10 De novo assembly of soybean wild relatives for pan-genome analysis of diversity and agronomic traits Yinghui Li et al. · Nature Biotechnology Open access 14 Sep 2014 737
11 Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza Joshua C. Stein et al. · Nature Genetics Open access 16 Jan 2018 647
12 Widespread natural variation of DNA methylation within angiosperms Chad E. Niederhuth, Adam J. Bewick, Lexiang Ji et al. · Genome biology Open access 23 Sep 2016 609
13 Genome sequence of mungbean and insights into evolution within Vigna species Yang Jae Kang et al. · Nature Communications Open access 11 Nov 2014 604
14 Targeted genome modifications in soybean with CRISPR/Cas9 Thomas B. Jacobs, Peter R. LaFayette, Robert J. Schmitz et al. · BMC Biotechnology Open access 11 Mar 2015 587
15 Evolution of plant genome architecture Jonathan F. Wendel, Scott A. Jackson, Blake C. Meyers et al. · Genome biology Open access 29 Feb 2016 520
16 Toward Sequencing Cotton ( Gossypium ) Genomes: Figure 1. Z. Jeffrey Chen et al. · PLANT PHYSIOLOGY Open access Dec 2007 485
17 Finding and Comparing Syntenic Regions among Arabidopsis and the Outgroups Papaya, Poplar, and Grape: CoGe with Rosids Eric H. Lyons, Brent S. Pedersen, Josh Kane et al. · PLANT PHYSIOLOGY Open access 24 Oct 2008 471
18 A Novel Mutation in the Cystic Fibrosis Gene in Patients with Pulmonary Disease but Normal Sweat Chloride Concentrations William Edward Highsmith, Lauranell H. Burch, Zhaoqing Zhou et al. · New England Journal of Medicine Open access 13 Oct 1994 443
19 Current Progress in Nitrogen Fixing Plants and Microbiome Research Kishan Mahmud, Shiva Makaju, Razi Ibrahim et al. · Plants Open access 13 Jan 2020 415
20 Genome evolution and diversity of wild and cultivated potatoes Dié Tang, Yuxin Jia, Jinzhe Zhang et al. · Nature Open access 8 Jun 2022 404
21 Machine learning and complex biological data Chunming Xu, Scott A. Jackson · Genome biology Open access 16 Apr 2019 396
22 Multiple Paleopolyploidizations during the Evolution of the Compositae Reveal Parallel Patterns of Duplicate Gene Retention after Millions of Years Michael S. Barker, Nolan C. Kane, Martha Matvienko et al. · Molecular Biology and Evolution Open access 21 Aug 2008 365
23 Phase 2 Clinical Trial of a Recombinant Adeno-Associated Viral Vector Expressing α 1 -Antitrypsin: Interim Results Terence R. Flotte, Bruce C. Trapnell, Margaret Humphries et al. · Human Gene Therapy Open access 24 May 2011 330
24 The once and future gene therapy Karen Bulaklak, Charles A. Gersbach · Nature Communications Open access 16 Nov 2020 327
25 Sustained transgene expression despite T lymphocyte responses in a clinical trial of rAAV1-AAT gene therapy Mark Brantly, Jeffrey David Chulay, Lili Wang et al. · Proceedings of the National Academy of Sciences Open access 12 Aug 2009 324
26 Comparative Genomics of Plant Chromosomes Andrew H. Paterson, John Bowers, Mark D. Burow et al. · The Plant Cell Open access Sep 2000 319
27 Exploiting SNP s for biallelic CRISPR mutations in the outcrossing woody perennial Populus reveals 4‐coumarate:CoA ligase specificity and redundancy Xiaohong Zhou, Thomas B. Jacobs, Liang‐Jiao Xue et al. · New Phytologist Open access 13 May 2015 309
28 GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist pathogens Giardia lamblia and Trichomonas vaginalis Cristina Aurrecoechea et al. · Nucleic Acids Research Open access 30 Sep 2008 300
29 QTL analysis of genotype × environment interactions affecting cotton fiber quality A. H. Paterson, Yehoshua Saranga, Monica A. Menz et al. · Theoretical and Applied Genetics Feb 2003 297
30 Overdominant Epistatic Loci Are the Primary Genetic Basis of Inbreeding Depression and Heterosis in Rice. II. Grain Yield Components Lijun Luo, Z.-K. Li, Hanwei Mei et al. · Genetics Aug 2001 293
31 ZINC TRANSPORTER5 and ZINC TRANSPORTER9 Function Synergistically in Zinc/Cadmium Uptake Longtao Tan, Mengmeng Qu, Yuxing Zhu et al. · PLANT PHYSIOLOGY Open access 27 Apr 2020 285
32 A guideline on the molecular ecosystem regulating ferroptosis Enyong Dai et al. · Nature Cell Biology Open access 29 Feb 2024 282
33 Parallel selection on a dormancy gene during domestication of crops from multiple families Min Wang et al. · Nature Genetics 21 Sep 2018 274
34 Deficiency of the Stress Kinase P38α Results in Embryonic Lethality Melanie R. Allen, Linne Svensson, Marsha L. Roach et al. · The Journal of Experimental Medicine Open access 6 Mar 2000 270
35 The First 50 Plant Genomes Todd P. Michael, Scott A. Jackson · The Plant Genome Open access Jul 2013 270
36 Modeling 3D Facial Shape from DNA Peter D. Claes et al. · PLoS Genetics Open access 20 Mar 2014 266
37 Genome resources for climate‐resilient cowpea, an essential crop for food security María Muñoz‐Amatriaín et al. · The Plant Journal Open access 24 Oct 2016 241
38 Construction and comparison of three reference‐quality genome assemblies for soybean Babu Valliyodan et al. · The Plant Journal Open access 21 Aug 2019 238
39 Nitrogen Losses and Potential Mitigation Strategies for a Sustainable Agroecosystem Kishan Mahmud, Dinesh Panday, Anaas Moncef Mergoum et al. · Sustainability Open access 23 Feb 2021 234
40 Extensive Chromosomal Repatterning and the Evolution of Sterility Barriers in Hybrid Sunflower Species Zhao Lai, Takuya Nakazato, Marzia Salmaso et al. · Genetics Sep 2005 229
41 Women’s experiences receiving abnormal prenatal chromosomal microarray testing results Barbara A. Bernhardt, Danielle Soucier, Karen J. Hanson et al. · Genetics in Medicine Open access 6 Sep 2012 227
42 Single Nucleotide Polymorphism–based Genetic Diversity in the Reference Set of Peanut ( Arachis spp.) by Developing and Applying Cost‐Effective Kompetitive Allele Specific Polymerase Chain Reaction Genotyping Assays Pawan Khera, Hari Deo Upadhyaya, Manish Kumar Pandey et al. · The Plant Genome Open access Nov 2013 226
43 Results at 2 Years after Gene Therapy for RPE65-Deficient Leber Congenital Amaurosis and Severe Early-Childhood–Onset Retinal Dystrophy Richard G. Weleber, Mark Edward Pennesi, David J. D. Wilson et al. · Ophthalmology Open access 22 Apr 2016 222
44 Single-cell multi-omics in the medicinal plant Catharanthus roseus Chenxin Li, Joshua C. Wood, Anh Hai Vu et al. · Nature Chemical Biology Open access 15 May 2023 218
45 Microsatellite identification and characterization in peanut (A. hypogaea L.) Morag Elizabeth Ferguson, Mark D. Burow, Stefan R. Schulze et al. · Theoretical and Applied Genetics 11 Dec 2003 218
46 An open dataset of Plasmodium falciparum genome variation in 7,000 worldwide samples MalariaGEN et al. · Wellcome Open Research Open access138 authors 24 Feb 2021 200
47 Effects of nitrogen fertilization on biomass yield and quality in large fields of established switchgrass in southern Iowa, USA Roque Lemus, E. Charles Brummer, C. Lee Burras et al. · Biomass and Bioenergy 4 Apr 2008 200
48 A major QTL conditioning salt tolerance in S-100 soybean and descendent cultivars Geung‐Joo Lee, H. Roger Boerma, M. R. Villagarcia et al. · Theoretical and Applied Genetics 8 Sep 2004 197
49 QTL Analysis in a Complex Autopolyploid: Genetic Control of Sugar Content in Sugarcane Ray Ming, Sin‐Chieh Liu, Paul H. Moore et al. · Genome Research Open access 12 Nov 2001 196
50 Development and Evaluation of a High Density Genotyping ‘Axiom_Arachis’ Array with 58 K SNPs for Accelerating Genetics and Breeding in Groundnut Manish Kumar Pandey, Gaurav Agarwal, Sandip Mallikarjun Kale et al. · Scientific Reports Open access 16 Jan 2017 194

Citations are OpenAlex's own counts, from its 2026-09-23 snapshot, so the ranking can differ from Google Scholar or Web of Science. A paper is listed for an institution when any of its authors gave it as an affiliation; retracted papers and papers whose citation count cannot be traced to citing works are left out, and a preprint and the article it became are shown once. Release dates are OpenAlex's: where a source gave only a month or a year, that is what is shown. How the lists are chosen.