| 1 |
Quantifying orthogonal barcodes for sequence census assays
A. Sina Booeshaghi, Kyung Hoi Min, Jase Gehring et al. · Bioinformatics Advances
Open access |
20 Dec 2023 |
13 |
| 2 |
Phage DNA extraction with phenol-chloroform and digestion to single nucleosides v1
Adair L. Borges
PreprintOpen access |
28 Nov 2022 |
4 |
| 3 |
Phage resistance mutations affecting the bacterial cell surface increase susceptibility to fungi in a model cheese community
Tara Leigh Spencer Noakes, Angel Jose Sarabia, Gary E. Heussler et al. · ISME Communications
Open access |
2024 |
3 |
| 4 |
O-antigen biosynthesis mediates evolutionary trade-offs within a simple community
Tara Leigh Spencer Noakes, Angel Jose Sarabia, Gary E. Heussler et al. · bioRxiv (Cold Spring Harbor Laboratory)
PreprintOpen access |
15 Nov 2023 |
1 |
| 5 |
Phage amplification and concentration v1
Adair Borges
PreprintOpen access |
21 Jun 2022 |
1 |
| 6 |
A parallel transcriptomics and proteomics workflow for organisms with minimal reference protein databases v2
Peter S. Thuy-Boun
PreprintOpen access |
14 May 2022 |
1 |
| 7 |
Chlamydomonas Cellular Phenotypes Enable in vivo Validation of Computationally Designed Therapeutic ADA1 Variants
MacQuarrie, Cameron · Zenodo (CERN European Organization for Nuclear Research)
Open access |
4 Dec 2025 |
0 |
| 8 |
A behavioral assay for measuring acute itch in mice v1
Seemay Chou, Behnom Farboud, Claire Kwon et al.
PreprintOpen access |
14 Jul 2025 |
0 |
| 9 |
C. elegans culture and maintenance v1
Justin Donnelly
PreprintOpen access |
22 Aug 2024 |
0 |
| 10 |
AcrIF11 is a potent CRISPR-specific ADP-ribosyltransferase encoded by phage and plasmid
Daphne F. Chen, Leah Tang Roe, Yuping Li et al. · bioRxiv (Cold Spring Harbor Laboratory)
PreprintOpen access |
26 Aug 2024 |
0 |
| 11 |
Building a phenotype-o-mat: A low-cost DIY plate reader for high-throughput phenotype measurements v1
Ben Braverman
PreprintOpen access |
13 Feb 2024 |
0 |
| 12 |
Immobilizing cells for live imaging v1
Tara Essock‐Burns, David Q. Matus
PreprintOpen access |
26 Oct 2023 |
0 |
| 13 |
Discovering shared protein structure signatures connected to polyphosphate accumulation in diverse bacteria
Elizabeth McDaniel · Zenodo (CERN European Organization for Nuclear Research)
Open access |
25 Sep 2023 |
0 |
| 14 |
Data and workflow outputs used in the application of NovelTree to 36 species of TSAR eukaryotes
Austin H. Patton · Zenodo (CERN European Organization for Nuclear Research)
Open access |
10 Aug 2023 |
0 |
| 15 |
Enriching and isolating phages on agar plates v1
Adair L. Borges
PreprintOpen access |
6 Jun 2023 |
0 |
| 16 |
Enriching and isolating phages in liquid culture v1
Adair Borges
PreprintOpen access |
5 Jun 2023 |
0 |
| 17 |
Genomes and host 16s for phages isolated from cheese microbial communities
Adair L. Borges · Zenodo (CERN European Organization for Nuclear Research)
Open access |
10 Jul 2023 |
0 |
| 18 |
Isolation of bacteria and fungi from cheese rind microbiomes v1
Emily C.P. Weiss
PreprintOpen access |
19 Jan 2023 |
0 |
| 19 |
Molding microchambers in agar with PDMS stamps for live imaging v1
Tara Essock‐Burns
PreprintOpen access |
28 Mar 2023 |
0 |
| 20 |
A Machine Learning Approach to Finding Factors that Lead to Environmental Friendliness
Sucheer Maddury, Anjana Manian · Journal of Student Research
Open access |
28 Feb 2023 |
0 |
| 21 |
A simple method to dramatically increase C. elegans germline microinjection efficiency
Theresa V Gibney, Michelle Favichia, Laila Latifi et al. · bioRxiv (Cold Spring Harbor Laboratory)
PreprintOpen access |
25 Mar 2023 |
0 |
| 22 |
Phage infection and timed harvest of E. coli and B. subtilis cells v1
Januka S. Athukoralage
PreprintOpen access |
21 Feb 2023 |
0 |
| 23 |
Calculating multiplicity of infection (MOI) v1
Januka S. Athukoralage
PreprintOpen access |
9 Mar 2023 |
0 |
| 24 |
High-molecular-weight DNA extraction from cheese rind microbial communities v1
Emily C.P. Weiss
PreprintOpen access |
12 Dec 2022 |
0 |
| 25 |
Harvesting and stocking cheese rind community samples v1
Emily C.P. Weiss
PreprintOpen access |
14 Dec 2022 |
0 |
| 26 |
Virome DNA extraction with phenol-chloroform v1
Adair L. Borges
PreprintOpen access |
21 Feb 2023 |
0 |
| 27 |
Virome harvesting from cheese microbiomes v1
Adair Borges
PreprintOpen access |
21 Feb 2023 |
0 |
| 28 |
Protocol collection: Sampling and characterizing cheese rind microbial communities v1
Adair L. Borges
PreprintOpen access |
28 Feb 2023 |
0 |
| 29 |
Nucleoside analysis with liquid chromatography–tandem mass spectrometry (LC–MS/MS) v1
Peter S. Thuy-Boun
PreprintOpen access |
19 Sep 2022 |
0 |
| 30 |
Phage DNA extraction with Monarch kit and digestion to single nucleosides v1
Atanas D. Radkov
PreprintOpen access |
19 Sep 2022 |
0 |
| 31 |
Nucleoside analysis with high performance liquid chromatography (HPLC) v1
Atanas D. Radkov
PreprintOpen access |
19 Sep 2022 |
0 |
| 32 |
Protocol collection: Phage DNA isolation and chemical analysis v1
Adair L. Borges
PreprintOpen access |
19 Sep 2022 |
0 |