Institution · ATUM (United States)
Most cited papers from ATUM (United States)
What are the most cited papers from ATUM (United States)?
The most cited paper from ATUM (United States) is "Determination and Inference of Eukaryotic Transcription Factor Sequence Specificity" (Matthew T. Weirauch et al., 2014), with 2,079 citations. Next come "Codon bias and heterologous protein expression" (1,357) and "Broadly neutralizing antibodies overcome SARS-CoV-2 Omicron antigenic shift" (1,212).
Showing 50 of 58 papers. Every paper with more than 41 citations is listed.
| # | Paper | ||
|---|---|---|---|
| 1 | Determination and Inference of Eukaryotic Transcription Factor Sequence Specificity Matthew T. Weirauch et al. · Cell | Sep 2014 | 2,079 |
| 2 | Codon bias and heterologous protein expression Claes Gustafsson, Sridhar Govindarajan, Jeremy Minshull · Trends in biotechnology | May 2004 | 1,357 |
| 3 | Broadly neutralizing antibodies overcome SARS-CoV-2 Omicron antigenic shift Elisabetta Cameroni et al. · Nature | 23 Dec 2021 | 1,212 |
| 4 | Defining the features and duration of antibody responses to SARS-CoV-2 infection associated with disease severity and outcome Katharina Röltgen et al. · Science Immunology | 8 Dec 2020 | 509 |
| 5 | Formation of Human Myocardium in the Rat Heart from Human Embryonic Stem Cells Michael A. Laflamme, Joseph D. Gold, Chunhui Xu et al. · American Journal Of Pathology | Sep 2005 | 455 |
| 6 | Transcription factor IRF4 drives dendritic cells to promote Th2 differentiation Jesse W. Williams, Melissa Yuwono Tjota, Bryan S. Clay et al. · Nature Communications | 20 Dec 2013 | 412 |
| 7 | Palaeotemperature trend for Precambrian life inferred from resurrected proteins Eric A. Gaucher, Sridhar Govindarajan, Omjoy K. Ganesh · Nature | Feb 2008 | 405 |
| 8 | Gene Designer: a synthetic biology tool for constructing artificial DNA segments Alan Villalobos, Jon E. Ness, Claes Gustafsson et al. · BMC Bioinformatics | 6 Jun 2006 | 381 |
| 9 | Design Parameters to Control Synthetic Gene Expression in Escherichia coli Mark Welch, Sridhar Govindarajan, Jon E. Ness et al. · PLoS ONE | 11 Sep 2009 | 361 |
| 10 | The APC/C maintains the spindle assembly checkpoint by targeting Cdc20 for destruction Jakob Nilsson, Mona Yekezare, Jeremy Minshull et al. · Nature Cell Biology | 9 Nov 2008 | 304 |
| 11 | The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology Michal Galdzicki et al. · Nature Biotechnology | Jun 2014 | 298 |
| 12 | Human B Cell Clonal Expansion and Convergent Antibody Responses to SARS-CoV-2 Sandra C. A. Nielsen et al. · Cell Host & Microbe | 3 Sep 2020 | 271 |
| 13 | A family of thermostable fungal cellulases created by structure-guided recombination Pete Heinzelman, Christopher Davis Snow, Indira Wu et al. · Proceedings of the National Academy of Sciences | 23 Mar 2009 | 270 |
| 14 | Promises and pitfalls in implementation science from the perspective of US-based researchers: learning from a pre-mortem Rinad S. Beidas, Shannon Dorsey, Cara C. Lewis et al. · Implementation Science | 13 Aug 2022 | 251 |
| 15 | Identification of likely orthologs of tobacco salicylic acid‐binding protein 2 and their role in systemic acquired resistance in Arabidopsis thaliana A. Corina Vlot, Po‐Pu Liu, Robin K. Cameron et al. · The Plant Journal | 9 Jul 2008 | 233 |
| 16 | Biosynthesis of Monomers for Plastics from Renewable Oils Wenhua Lu, Jon E. Ness, Wenchun Xie et al. · Journal of the American Chemical Society | 11 Oct 2010 | 216 |
| 17 | Engineering genes for predictable protein expression Claes Gustafsson, Jeremy Minshull, Sridhar Govindarajan et al. · Protein Expression and Purification | 8 Mar 2012 | 181 |
| 18 | Inhibiting membrane rupture with NINJ1 antibodies limits tissue injury Nobuhiko Kayagaki et al. · Nature | 17 May 2023 | 180 |
| 19 | Engineering the Salmonella type III secretion system to export spider silk monomers Daniel M Widmaier, Danielle Tullman‐Ercek, Ethan A. Mirsky et al. · Molecular Systems Biology | 15 Sep 2009 | 164 |
| 20 | Modeled Reductions in Late-stage Cancer with a Multi-Cancer Early Detection Test Earl A. Hubbell, Christina A. Clarke, Alexander M. Aravanis et al. · Cancer Epidemiology Biomarkers & Prevention | 16 Dec 2020 | 155 |
| 21 | Automatic Creation of Human-Competitive Programs and Controllers by Means of Genetic Programming John R. Koza, Martin A. Keane, Jessen Yu et al. · Genetic Programming and Evolvable Machines | Apr 2000 | 149 |
| 22 | Redesigning and characterizing the substrate specificity and activity of Vibrio fluvialis aminotransferase for the synthesis of imagabalin Katarina Senn Midelfort, R. Pravin Kumar, Seungil Han et al. · Protein Engineering Design and Selection | 25 Sep 2012 | 137 |
| 23 | Optimization of Protein Expression in Mammalian Cells Molly Hunter, Ping Yuan, Divya Teja Vavilala et al. · Current Protocols in Protein Science | 28 Sep 2018 | 129 |
| 24 | NF-κB inducing kinase is a therapeutic target for systemic lupus erythematosus Hans D. Brightbill et al. · Nature Communications | 8 Jan 2018 | 128 |
| 25 | SCHEMA Recombination of a Fungal Cellulase Uncovers a Single Mutation That Contributes Markedly to Stability Pete Heinzelman, Christopher Davis Snow, Matthew A. Smith et al. · Journal of Biological Chemistry | 23 Jul 2009 | 126 |
| 26 | Prognostic Significance of Blood-Based Multi-cancer Detection in Plasma Cell-Free DNA Xiaoji Chen, Dong Zhao, Earl A. Hubbell et al. · Clinical Cancer Research | 4 Jun 2021 | 122 |
| 27 | You're one in a googol: optimizing genes for protein expression Mark Welch, Alan Villalobos, Claes Gustafsson et al. · Journal of The Royal Society Interface | 11 Mar 2009 | 120 |
| 28 | Forensic Mitochondrial DNA Analysis of 691 Casework Hairs Terry W. Melton, Gloria Dimick, Brian Higgins et al. · Journal of Forensic Sciences | 18 Nov 2004 | 115 |
| 29 | Genetic Programming as a Darwinian Invention Machine John R. Koza, Forrest H Bennett, Oscar Stiffelman · Lecture notes in computer science | 1999 | 112 |
| 30 | The sound of a tropical forest Zuzana Buřivalová, Edward T. Game, Rhett A. Butler · Science | 3 Jan 2019 | 110 |
| 31 | Potassium channels Kv1.3 and KCa3.1 cooperatively and compensatorily regulate antigen-specific memory T cell functions Eugene Y. Chiang, Tianbo Li, Surinder Jeet et al. · Nature Communications | Mar 2017 | 107 |
| 32 | Engineering proteinase K using machine learning and synthetic genes Jun Liao, Manfred K. Warmuth, Sridhar Govindarajan et al. · BMC Biotechnology | 26 Mar 2007 | 107 |
| 33 | Strategies for Training Large Vocabulary Neural Language Models Wenlin Chen, David Grangier, Michael Auli | 2016 | 106 |
| 34 | Construction of stable packaging cell lines for clinical lentiviral vector production Khaled S. Sanber, Sean Knight, Sam Laurel Stephen et al. · Scientific Reports | 12 Mar 2015 | 106 |
| 35 | Seismovolcanic signals at Deception Island volcano, Antarctica: Wave field analysis and source modeling Jesús M. Ibáñez, Edoardo Del Pezzo, Javier Almendros et al. · Journal of Geophysical Research Atmospheres | 10 Jun 2000 | 106 |
| 36 | Argillization by Descending Acid at Steamboat Springs, Nevada Robert Schoen, Donald Edward White, J. Julian Hemley · Clays and Clay Minerals | Feb 1974 | 104 |
| 37 | Temporal evolution of continental lithospheric strength in actively deforming regions Wayne R. Thatcher, Fred F. Pollitz · GSA Today | 2008 | 103 |
| 38 | Potential T-cell and B-cell Epitopes of 2019-nCoV Ethan Fast, Russ Biagio Altman, Binbin Chen · bioRxiv (Cold Spring Harbor Laboratory) | 21 Feb 2020 | 100 |
| 39 | Non-volcanic Tremor: A Window into the Roots of Fault Zones Justin L. Rubinstein, D. R. Shelly, William L. Ellsworth | 2009 | 100 |
| 40 | Glycemic Variability Percentage: A Novel Method for Assessing Glycemic Variability from Continuous Glucose Monitor Data Thomas A. Peyser, Andrew K. Balo, Bruce A. Buckingham et al. · Diabetes Technology & Therapeutics | 11 Dec 2017 | 92 |
| 41 | Reconstructed evolutionary adaptive paths give polymerases accepting reversible terminators for sequencing and SNP detection Fei Chen, Eric A. Gaucher, Nicole A. Leal et al. · Proceedings of the National Academy of Sciences | 11 Jan 2010 | 90 |
| 42 | Protein engineering of improved prolyl endopeptidases for celiac sprue therapy Jennifer Ehren, Sridhar Govindarajan, Belén Morón et al. · Protein Engineering Design and Selection | 4 Oct 2008 | 88 |
| 43 | FitSNPs: highly differentially expressed genes are more likely to have variants associated with disease Rongrong Chen, Alex A. Morgan, Joel T. Dudley et al. · Genome biology | 5 Dec 2008 | 84 |
| 44 | Locations and magnitudes of historical earthquakes in the Sierra of Ecuador (1587-1996) Céline Beauval, Hugo A. Yepes, W. H. Bakun et al. · Geophysical Journal International | Apr 2010 | 83 |
| 45 | Urinary symptoms are associated with certain urinary microbes in urogynecologic surgical patients Cynthia S. Fok, Xiang Gao, Huaiying Lin et al. · International Urogynecology Journal | 16 Aug 2018 | 82 |
| 46 | Tumor BRCA1 Reversion Mutation Arising during Neoadjuvant Platinum-Based Chemotherapy in Triple-Negative Breast Cancer Is Associated with Therapy Resistance Anosheh Afghahi, Kirsten M. Timms, Shaveta Vinayak et al. · Clinical Cancer Research | 13 Jan 2017 | 76 |
| 47 | Projected Reductions in Absolute Cancer–Related Deaths from Diagnosing Cancers Before Metastasis, 2006–2015 Christina A. Clarke, Earl A. Hubbell, Allison W. Kurian et al. · Cancer Epidemiology Biomarkers & Prevention | 31 Mar 2020 | 75 |
| 48 | Validation of RNAi silencing specificity using synthetic genes: salicylic acid‐binding protein 2 is required for innate immunity in plants Dhirendra Kumar, Claes Gustafsson, Daniel F. Klessig · The Plant Journal | 31 Jan 2006 | 72 |
| 49 | Task-Driven Tactile Exploration Kai-yuh Hsiao, Leslie Pack Kaelbling, Tomás Lozano‐Pérez | 27 Jun 2010 | 69 |
| 50 | Numerical modeling of injection, stress and permeability enhancement during shear stimulation at the Desert Peak Enhanced Geothermal System David E. Dempsey, Sharad Kelkar, Nicholas C. Davatzes et al. · International Journal of Rock Mechanics and Mining Sciences | 2 Jul 2015 | 67 |
Citations are OpenAlex's own counts, from its 2026-09-23 snapshot, so the ranking can differ from Google Scholar or Web of Science. A paper is listed for an institution when any of its authors gave it as an affiliation; retracted papers and papers whose citation count cannot be traced to citing works are left out, and a preprint and the article it became are shown once. Release dates are OpenAlex's: where a source gave only a month or a year, that is what is shown. How the lists are chosen.