Institution · Centre for BioSystems Genomics
Most cited papers from Centre for BioSystems Genomics
What are the most cited papers from Centre for BioSystems Genomics?
The most cited paper from Centre for BioSystems Genomics is "The tomato genome sequence provides insights into fleshy fruit evolution" (Hideki Hirakawa et al., 2012), with 3,442 citations. Next come "Hormonal Modulation of Plant Immunity" (3,085) and "The rhizosphere microbiome: significance of plant beneficial, plant pathogenic, and human pathogenic microorganisms" (2,862).
Showing 50 of 60 papers. Every paper with more than 442 citations is listed.
| # | Paper | ||
|---|---|---|---|
| 1 | The tomato genome sequence provides insights into fleshy fruit evolution Hideki Hirakawa et al. · Nature | May 2012 | 3,442 |
| 2 | Hormonal Modulation of Plant Immunity Corné M. J. Pieterse, Dieuwertje van der Does, Christos Zamioudis et al. · Annual Review of Cell and Developmental Biology | 2 Mar 2011 | 3,085 |
| 3 | The rhizosphere microbiome: significance of plant beneficial, plant pathogenic, and human pathogenic microorganisms Rodrigo Mendes, Paolina Garbeva, Jos M. Raaijmakers · FEMS Microbiology Reviews | 23 Jun 2013 | 2,862 |
| 4 | Genome sequence and analysis of the tuber crop potato X X Xu et al. · Nature | Jul 2011 | 2,140 |
| 5 | Properties of bacterial endophytes and their proposed role in plant growth Pablo R. Hardoim, Leo S. van Overbeek, Jan Dirk van Elsas · Trends in Microbiology | 14 Sep 2008 | 1,707 |
| 6 | Analyses of pig genomes provide insight into porcine demography and evolution Martien A. M. Groenen et al. · Nature | Nov 2012 | 1,454 |
| 7 | Enrichment of tomato fruit with health-promoting anthocyanins by expression of select transcription factors Eugenio Butelli, Lucilla Titta, Marco Giorgio et al. · Nature Biotechnology | 26 Oct 2008 | 1,278 |
| 8 | Improving agricultural water productivity: Between optimism and caution David James Molden, Theib Oweis, Pasquale Steduto et al. · Agricultural Water Management | 11 Jun 2009 | 1,113 |
| 9 | Of PAMPs and Effectors: The Blurred PTI-ETI Dichotomy Bart P. H. J. Thomma, Thorsten Nürnberger, MATTHIEU H. A. J. JOOSTEN · The Plant Cell | 2011 | 1,081 |
| 10 | Plant molecular stress responses face climate change Ishita Ahuja, Ric C. H. de Vos, Atle Magnar Bones et al. · Trends in Plant Science | 17 Sep 2010 | 1,068 |
| 11 | Untargeted large-scale plant metabolomics using liquid chromatography coupled to mass spectrometry Ric CH de Vos, Sofia Moco, Arjen Lommen et al. · Nature Protocols | Apr 2007 | 1,046 |
| 12 | Physiology and molecular aspects of Verticillium wilt diseases caused by V. dahliae and V. albo‐atrum Emilie F. Fradin, Bart P. H. J. Thomma · Molecular Plant Pathology | 30 Jan 2006 | 966 |
| 13 | The Path from β-Carotene to Carlactone, a Strigolactone-Like Plant Hormone Adrian Alder, Muhammad Jamil, Mattia Marzorati et al. · Science | 15 Mar 2012 | 954 |
| 14 | Fungal Effector Proteins Ioannis Stergiopoulos, PIERRE J. G. M. DE WIT · Annual Review of Phytopathology | 13 May 2009 | 939 |
| 15 | Carbon sequestration in the agricultural soils of Europe Annette Freibauer, Mark Rounsevell, Pete Smith et al. · Geoderma | 28 Feb 2004 | 935 |
| 16 | Strigolactones, a Novel Carotenoid-Derived Plant Hormone Salim Al‐Babili, Harro J. Bouwmeester · Annual Review of Plant Biology | 26 Jan 2015 | 892 |
| 17 | Not just a grain of rice: the quest for quality Melissa Anne Fitzgerald, Susan R. McCouch, Robert D. Hall · Trends in Plant Science | 19 Feb 2009 | 889 |
| 18 | RNA interference in Lepidoptera: An overview of successful and unsuccessful studies and implications for experimental design Olle Terenius et al. · Journal of Insect Physiology | 21 Nov 2010 | 870 |
| 19 | Oxygen sensing in plants is mediated by an N-end rule pathway for protein destabilization Francesco Licausi, Monika Kosmacz, Daan A. Weits et al. · Nature | 21 Oct 2011 | 838 |
| 20 | Design of a High Density SNP Genotyping Assay in the Pig Using SNPs Identified and Characterized by Next Generation Sequencing Technology Antonio M. Ramos et al. · PLoS ONE | 4 Aug 2009 | 804 |
| 21 | Minimum required number of specimen records to develop accurate species distribution models André S. J. van Proosdij, Marc S.M. Sosef, Jan J. Wieringa et al. · Ecography | 30 May 2015 | 804 |
| 22 | Conserved Fungal LysM Effector Ecp6 Prevents Chitin-Triggered Immunity in Plants Ronnie de Jonge, H. Peter van Esse, Anja Kombrink et al. · Science | 19 Aug 2010 | 794 |
| 23 | Potential of metabolomics as a functional genomics tool Raoul J Bino, Robert D. Hall, Oliver Fiehn et al. · Trends in Plant Science | 10 Aug 2004 | 790 |
| 24 | Have biopesticides come of age? Travis R. Glare, J. R. Caradus, Wendy D. Gelernter et al. · Trends in biotechnology | 13 Feb 2012 | 761 |
| 25 | The strawberry FaMYB1 transcription factor suppresses anthocyanin and flavonol accumulation in transgenic tobacco Asaph Aharoni, C. H. Ric De Vos, Martina Wein et al. · The Plant Journal | Nov 2001 | 698 |
| 26 | Sugar signals and molecular networks controlling plant growth SJEF C. M. SMEEKENS, Jingkun Ma, Johannes Hanson et al. · Current Opinion in Plant Biology | 8 Jan 2010 | 673 |
| 27 | DNA barcoding of oomycetes with cytochrome c oxidase subunit I and internal transcribed spacer G.P. Robideau, Arthur W. A. M. de Cock, Michael D. Coffey et al. · Molecular Ecology Resources | 20 Jun 2011 | 668 |
| 28 | Proteomic Analysis of Arabidopsis Seed Germination and Priming Karine Gallardo, Claudette Job, S.P.C. Groot et al. · PLANT PHYSIOLOGY | Jun 2001 | 637 |
| 29 | Comprehensive Interaction Map of the Arabidopsis MADS Box Transcription Factors Stefan de Folter, Richard G. H. Immink, Martin Kieffer et al. · The Plant Cell | Apr 2005 | 630 |
| 30 | Making sense of low oxygen sensing Julia N. Bailey-Serres, Takeshi Fukao, Daniel J. Gibbs et al. · Trends in Plant Science | 29 Jan 2012 | 622 |
| 31 | Physiological Effects of the Synthetic Strigolactone Analog GR24 on Root System Architecture in Arabidopsis: Another Belowground Role for Strigolactones? Carolien P. Ruyter-Spira, Wouter Kohlen, Tatsiana V. Charnikhova et al. · PLANT PHYSIOLOGY | 30 Nov 2010 | 621 |
| 32 | The White Spot Syndrome Virus DNA Genome Sequence M.C.W. van Hulten, Jeroen Witteveldt, Sander Peters et al. · Virology | Jul 2001 | 612 |
| 33 | A petunia ABC protein controls strigolactone-dependent symbiotic signalling and branching Tobias Kretzschmar, Wouter Kohlen, Joëlle Sasse et al. · Nature | Mar 2012 | 607 |
| 34 | Developmental and evolutionary diversity of plant MADS-domain factors: insights from recent studies Cezary Smaczniak, Richard G. H. Immink, Gerco C. Angenent et al. · Development | 7 Aug 2012 | 603 |
| 35 | A Liquid Chromatography-Mass Spectrometry-Based Metabolome Database for Tomato Sofia Moco, Raoul J Bino, Oscar Vorst et al. · PLANT PHYSIOLOGY | Aug 2006 | 587 |
| 36 | The butterfly plant arms-race escalated by gene and genome duplications Patrick P. Edger et al. · Proceedings of the National Academy of Sciences | 22 Jun 2015 | 582 |
| 37 | Tomato immune receptor Ve1 recognizes effector of multiple fungal pathogens uncovered by genome and RNA sequencing Ronnie de Jonge, H. Peter van Esse, Karunakaran Maruthachalam et al. · Proceedings of the National Academy of Sciences | 13 Mar 2012 | 579 |
| 38 | Effector diversification within compartments of the Leptosphaeria maculans genome affected by Repeat-Induced Point mutations Thierry Rouxel et al. · Nature Communications | 15 Feb 2011 | 570 |
| 39 | Starch as a major integrator in the regulation of plant growth Ronan Sulpice, Eva‐Theresa Pyl, Hirofumi Ishihara et al. · Proceedings of the National Academy of Sciences | 8 Jun 2009 | 567 |
| 40 | Identification and characterization of MYB ‐b HLH ‐ WD 40 regulatory complexes controlling proanthocyanidin biosynthesis in strawberry ( F ragaria × ananassa ) fruits Jan G. Schaart, Christian Dubos, Irene Romero De La Fuente et al. · New Phytologist | 16 Nov 2012 | 555 |
| 41 | An RLP23–SOBIR1–BAK1 complex mediates NLP-triggered immunity Isabell Albert, Hannah Böhm, Markus Albert et al. · Nature Plants | 5 Oct 2015 | 540 |
| 42 | Orchestration of Floral Initiation by APETALA1 Kerstin Kaufmann, Frank Wellmer, José M. Muiño et al. · Science | Apr 2010 | 537 |
| 43 | Characterization of MADS-domain transcription factor complexes in Arabidopsis flower development Cezary Smaczniak, Richard G. H. Immink, José M. Muiño et al. · Proceedings of the National Academy of Sciences | 11 Jan 2012 | 533 |
| 44 | Identification of the SAAT Gene Involved in Strawberry Flavor Biogenesis by Use of DNA Microarrays Asaph Aharoni, Leopold C. P. Keizer, Harro J. Bouwmeester et al. · The Plant Cell | May 2000 | 517 |
| 45 | A Novel Approach for Nontargeted Data Analysis for Metabolomics. Large-Scale Profiling of Tomato Fruit Volatiles Yury M. Tikunov, Arjen Lommen, C. H. Ric De Vos et al. · PLANT PHYSIOLOGY | Nov 2005 | 516 |
| 46 | Communicating complexity: Integrated assessment of trade-offs concerning soil fertility management within African farming systems to support innovation and development K.E. Giller et al. · Agricultural Systems | 19 Aug 2010 | 515 |
| 47 | Strigolactones Are Transported through the Xylem and Play a Key Role in Shoot Architectural Response to Phosphate Deficiency in Nonarbuscular Mycorrhizal Host Arabidopsis Wouter Kohlen, Tatsiana V. Charnikhova, Qing Liu et al. · PLANT PHYSIOLOGY | 30 Nov 2010 | 513 |
| 48 | Genetic Dissection ofVerticilliumWilt Resistance Mediated by Tomato Ve1 Emilie F. Fradin, Zhao Zhang, Juan C. Juarez Ayala et al. · PLANT PHYSIOLOGY | 25 Mar 2009 | 511 |
| 49 | Plant metabolomics: from holistic hope, to hype, to hot topic Robert D. Hall · New Phytologist | 10 Jan 2006 | 504 |
| 50 | The genetics of plant metabolism Joost J. B. Keurentjes, Jingyuan Fu, C. H. Ric De Vos et al. · Nature Genetics | 4 Jun 2006 | 501 |
Citations are OpenAlex's own counts, from its 2026-09-23 snapshot, so the ranking can differ from Google Scholar or Web of Science. A paper is listed for an institution when any of its authors gave it as an affiliation; retracted papers and papers whose citation count cannot be traced to citing works are left out, and a preprint and the article it became are shown once. Release dates are OpenAlex's: where a source gave only a month or a year, that is what is shown. How the lists are chosen.