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Institution · Dovetail Genomics (United States)

Most cited papers from Dovetail Genomics (United States)

Dovetail Genomics (United States)

What are the most cited papers from Dovetail Genomics (United States)?

The most cited paper from Dovetail Genomics (United States) is "Towards complete and error-free genome assemblies of all vertebrate species" (Arang Rhie et al., 2021), with 3,311 citations. Next come "A draft human pangenome reference" (1,231) and "Genome evolution in the allotetraploid frog Xenopus laevis" (1,066).

Showing 50 of 59 papers. Every paper with more than 17 citations is listed.

Most cited papers, sortable by citations and release date
#Paper
1 Towards complete and error-free genome assemblies of all vertebrate species Arang Rhie et al. · Nature Open access129 authors 28 Apr 2021 3,311
2 A draft human pangenome reference Wen‐Wei Liao et al. · Nature Open access119 authors 10 May 2023 1,231
3 Genome evolution in the allotetraploid frog Xenopus laevis Adam M. Session et al. · Nature Open access Oct 2016 1,066
4 Chromosome-scale shotgun assembly using an in vitro method for long-range linkage Nicholas H. Putnam, Brendan L. O’Connell, Jonathan C. Stites et al. · Genome Research Open access 4 Feb 2016 881
5 Origin and evolution of the octoploid strawberry genome Patrick P. Edger et al. · Nature Genetics Open access 25 Feb 2019 775
6 Loss of epigenetic information as a cause of mammalian aging Jae-Hyun Yang et al. · Cell Open access 2023 654
7 Deeply conserved synteny resolves early events in vertebrate evolution Oleg Simakov, Ferdinand Marlétaz, Jia‐Xing Yue et al. · Nature Ecology & Evolution Open access 20 Apr 2020 412
8 Pangenome graph construction from genome alignments with Minigraph-Cactus Glenn Hickey et al. · Nature Biotechnology Open access121 authors 10 May 2023 342
9 Targeting SWI/SNF ATPases in enhancer-addicted prostate cancer Lanbo Xiao et al. · Nature Open access 22 Dec 2021 328
10 Modeling precision treatment of breast cancer Anneleen Daemen et al. · Genome biology Open access 31 Oct 2013 325
11 Exome sequencing of desmoplastic melanoma identifies recurrent NFKBIE promoter mutations and diverse activating mutations in the MAPK pathway Alan Hunter Shain et al. · Nature Genetics Open access 7 Sep 2015 296
12 Haplotype-phased genome and evolution of phytonutrient pathways of tetraploid blueberry Marivi Colle et al. · GigaScience Open access 31 Jan 2019 278
13 Semi-automated assembly of high-quality diploid human reference genomes Erich D. Jarvis et al. · Nature Open access 19 Oct 2022 235
14 JARID1B Is a Luminal Lineage-Driving Oncogene in Breast Cancer Shoji Yamamoto et al. · Cancer Cell Open access Jun 2014 211
15 Chromosome-scale, haplotype-resolved assembly of human genomes Shilpa Garg et al. · Nature Biotechnology Open access 7 Dec 2020 209
16 Chromosome-level assembly of the water buffalo genome surpasses human and goat genomes in sequence contiguity Wai Yee Low, Rick G. Tearle, Derek M. Bickhart et al. · Nature Communications Open access 10 Jan 2019 192
17 Single-cell analyses of transcriptional heterogeneity during drug tolerance transition in cancer cells by RNA sequencing Mei-Chong Wendy Lee, Fernando J. López-Díaz, Shahid Y. Khan et al. · Proceedings of the National Academy of Sciences Open access 22 Oct 2014 184
18 Recombination between heterologous human acrocentric chromosomes Andrea Guarracino et al. · Nature Open access123 authors 10 May 2023 153
19 Genome biology of the paleotetraploid perennial biomass crop Miscanthus Therese Mitros et al. · Nature Communications Open access 28 Oct 2020 137
20 New Approaches for Genome Assembly and Scaffolding Edward S. Rice, Richard Edward Green · Annual Review of Animal Biosciences Review 28 Nov 2018 125
21 Transcription Restores DNA Repair to Heterochromatin, Determining Regional Mutation Rates in Cancer Genomes CHRISTINA L. ZHENG et al. · Cell Reports Open access Nov 2014 125
22 Increased mutation and gene conversion within human segmental duplications Mitchell R. Vollger et al. · Nature Open access130 authors 10 May 2023 123
23 Integrative clustering reveals a novel split in the luminal A subtype of breast cancer with impact on outcome OSBREAC et al. · Breast Cancer Research Open access 29 Mar 2017 122
24 Targeting RPL39 and MLF2 reduces tumor initiation and metastasis in breast cancer by inhibiting nitric oxide synthase signaling Bhuvanesh Dave et al. · Proceedings of the National Academy of Sciences Open access 29 May 2014 120
25 The molecular landscape of premenopausal breast cancer Serena G. Liao, Ryan James Hartmaier, Kandace P. McGuire et al. · Breast Cancer Research Open access 6 Aug 2015 104
26 Evolution of the ancestral mammalian karyotype and syntenic regions Joana Damas et al. · Proceedings of the National Academy of Sciences Open access128 authors 26 Sep 2022 98
27 Jellyfish genomes reveal distinct homeobox gene clusters and conservation of small RNA processing Wenyan Nong, Jian Cao, Yiqian Li et al. · Nature Communications Open access 19 Jun 2020 91
28 Horseshoe crab genomes reveal the evolution of genes and microRNAs after three rounds of whole genome duplication Wenyan Nong et al. · Communications Biology Open access 19 Jan 2021 76
29 Lymphocyte Invasion in IC10/Basal-Like Breast Tumors Is Associated with Wild-Type TP53 David Alan Quigley, Laxmi Silwal‐Pandit, Ruth Dannenfelser et al. · Molecular Cancer Research Open access 29 Oct 2014 61
30 Structural variant analysis of a cancer reference cell line sample using multiple sequencing technologies Keyur Talsania et al. · Genome biology Open access 13 Dec 2022 48
31 Improved genome assembly of American alligator genome reveals conserved architecture of estrogen signaling Edward S. Rice et al. · Genome Research Open access 30 Jan 2017 48
32 Millipede genomes reveal unique adaptations during myriapod evolution Zhe Qu, Wenyan Nong, Wai Lok So et al. · PLoS Biology Open access 29 Sep 2020 42
33 Chromosomal‐level reference genome of the incense tree Aquilaria sinensis Wenyan Nong, Sean T.S. Law, Annette Y. P. Wong et al. · Molecular Ecology Resources Open access 10 Mar 2020 40
34 Myriapod genomes reveal ancestral horizontal gene transfer and hormonal gene loss in millipedes Wai Lok So, Wenyan Nong, Yichun Xie et al. · Nature Communications Open access 30 May 2022 39
35 Chromosomal level genome of Ilex asprella and insight into antiviral triterpenoid pathway Bobby Lim‐Ho Kong, Wenyan Nong, Kwan-Ho Wong et al. · Genomics Open access 9 Apr 2022 37
36 Reconstruction of ancient homeobox gene linkages inferred from a new high-quality assembly of the Hong Kong oyster (Magallana hongkongensis) genome Yiqian Li, Wenyan Nong, Tobias Baril et al. · BMC Genomics Open access 15 Oct 2020 37
37 Ecological interactions between wild and hatchery salmonids and key recommendations for research and management actions in selected regions of the North Pacific Peter S. Rand, Barry A. Berejikian, Allison L. Bidlack et al. · Environmental Biology of Fishes 9 Mar 2012 36
38 One fly–one genome: chromosome-scale genome assembly of a single outbred Drosophila melanogaster Matthew S. Adams, Jakob McBroome, Nicholas W. Maurer et al. · Nucleic Acids Research Open access 19 May 2020 35
39 Genome of the ramshorn snail Biomphalaria straminea-an obligate intermediate host of schistosomiasis. Wenyan Nong, Yifei Yu, Madeleine E Aase-Remedios et al. · PubMed Open access 15 Feb 2022 34
40 Te Ara Mua - Future Streets suburban street retrofit: A researcher-community-government co-design process and intervention outcomes Hamish W. Mackie, Alexandra K. Macmillan, Karen Witten et al. · Journal of Transport & Health Open access 13 Sep 2018 33
41 Learning subgroup-specific regulatory interactions and regulator independence with PARADIGM Andrew J. Sedgewick, Stephen Charles Benz, Shahrooz Rabizadeh et al. · Bioinformatics Open access 19 Jun 2013 32
42 Reducing Unnecessary Hospital Readmissions: The Pharmacist's Role in Care Transitions Christopher J. Novak, Sylvia Hastanan, Moje Moradi et al. · The Consultant Pharmacist Mar 2012 31
43 Taking care of knowledge, taking care of salmon: towards Indigenous data sovereignty in an era of climate change and cumulative effects Sara E. Cannon et al. · FACETS Open access 2024 29
44 Personalized genome assembly for accurate cancer somatic mutation discovery using tumor-normal paired reference samples Chunlin Xiao, Zhong Chen, Wanqiu Chen et al. · Genome biology Open access 9 Nov 2022 29
45 Erosion of the Epigenetic Landscape and Loss of Cellular Identity as a Cause of Aging in Mammals Jae-Hyun Yang et al. · bioRxiv (Cold Spring Harbor Laboratory) PreprintOpen access 19 Oct 2019 29
46 Single-Cell mRNA-Seq Using the Fluidigm C1 System and Integrated Fluidics Circuits Haibiao Gong, Devin Do, Ramesh Ramakrishnan · Methods in molecular biology Book chapter 2018 27
47 Magic, Religion, and Ritual in Historical Archaeology M. Chris Manning · Historical Archaeology Sep 2014 27
48 Accurate chromosome-scale haplotype-resolved assembly of human genomes Shilpa Garg et al. · bioRxiv (Cold Spring Harbor Laboratory) PreprintOpen access 18 Oct 2019 26
49 A non-genetic switch triggers alternative telomere lengthening and cellular immortalization in ATRX deficient cells Timothy K. Turkalo, Antonio Maffia, Johannes J. Schabort et al. · Nature Communications Open access 20 Feb 2023 25
50 A 3-way hybrid approach to generate a new high-quality chimpanzee reference genome (Pan_tro_3.0) Lukas F. K. Kuderna et al. · GigaScience Open access 30 Oct 2017 24

Citations are OpenAlex's own counts, from its 2026-09-23 snapshot, so the ranking can differ from Google Scholar or Web of Science. A paper is listed for an institution when any of its authors gave it as an affiliation; retracted papers and papers whose citation count cannot be traced to citing works are left out, and a preprint and the article it became are shown once. Release dates are OpenAlex's: where a source gave only a month or a year, that is what is shown. How the lists are chosen.