| 1 |
Studies into the mechanism of measles-associated immune suppression during a measles outbreak in the Netherlands
Brigitta M. Laksono, Rory D. de Vries, R. Joyce Verburgh et al. · Nature Communications
Open access |
19 Nov 2018 |
128 |
| 2 |
Reverse TCR repertoire evolution toward dominant low-affinity clones during chronic CMV infection
Kilian Schober et al. · Nature Immunology
|
16 Mar 2020 |
119 |
| 3 |
T cell receptor next-generation sequencing reveals cancer-associated repertoire metrics and reconstitution after chemotherapy in patients with hematological and solid tumors
Donjetë Simnica, Nuray Akyüz, Simon Schliffke et al. · OncoImmunology
Open access |
25 Jul 2019 |
68 |
| 4 |
Next‐Generation Immunosequencing Reveals Pathological T‐Cell Architecture in Autoimmune Hepatitis
Christoph Schultheiß, Donjetë Simnica, Edith Willscher et al. · Hepatology
Open access |
21 Jul 2020 |
49 |
| 5 |
Proteogenomic analysis of the autoreactive B cell repertoire in blood and tissues of patients with Sjögren’s syndrome
Mathijs G A Broeren, Jing Jing Wang, G Balzaretti et al. · Annals of the Rheumatic Diseases
Open access |
10 Feb 2022 |
37 |
| 6 |
Analysis of Virus and Host Proteomes During Productive HSV-1 and VZV Infection in Human Epithelial Cells
Werner J. D. Ouwendijk, Lennard J. M. Dekker, Henk‐Jan van den Ham et al. · Frontiers in Microbiology
Open access |
29 May 2020 |
32 |
| 7 |
High-Throughput Immunogenetics Reveals a Lack of Physiological T Cell Clusters in Patients With Autoimmune Cytopenias
Donjetë Simnica, Simon Schliffke, Christoph Schultheiß et al. · Frontiers in Immunology
Open access |
21 Aug 2019 |
30 |
| 8 |
Alveolar barrier disruption in varicella pneumonia is associated with neutrophil extracellular trap formation
Werner J. D. Ouwendijk, Henk‐Jan van den Ham, Mark W. Delany et al. · JCI Insight
Open access |
6 Oct 2020 |
26 |
| 9 |
Characterization of the T cell receptor repertoire and melanoma tumor microenvironment upon combined treatment with ipilimumab and hTERT vaccination
Espen B. Ellingsen, Gergana Bounova, Iliana Kyriaki Kerzeli et al. · Journal of Translational Medicine
Open access |
11 Sep 2022 |
22 |
| 10 |
Response of metastatic mouse invasive lobular carcinoma to mTOR inhibition is partly mediated by the adaptive immune system
Sjoerd Klarenbeek, Chris W. Doornebal, Sjors M. Kas et al. · OncoImmunology
Open access |
2020 |
17 |
| 11 |
Deep sequencing of bone marrow microenvironments of patients with del(5q) myelodysplastic syndrome reveals imprints of antigenic selection as well as generation of novel T-cell clusters as a response pattern to lenalidomide
Thorben Mährle, Nuray Akyüz, Pim Fuchs et al. · Haematologica
Open access |
17 Jan 2019 |
11 |
| 12 |
Responsiveness to Immune Checkpoint Inhibitors Is Associated With a Peripheral Blood T-Cell Signature in Metastatic Castration-Resistant Prostate Cancer
Donjetë Simnica, Minke Smits, Edith Willscher et al. · JCO Precision Oncology
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Nov 2020 |
10 |
| 13 |
Regional soil moisture monitoring network in the Raam catchment in the Netherlands
Harm-Jan F. Benninga, Coleen Carranza, Michiel Pezij et al.
PreprintOpen access |
13 Jul 2017 |
10 |
| 14 |
Multi-timescale coordinated distributed energy resource control combining local and online feedback optimization
Sen Zhan, Johan Morren, Wouter P. van den Akker et al. · Electric Power Systems Research
Open access |
27 Jun 2024 |
8 |
| 15 |
ConBind: motif-aware cross-species alignment for the identification of functional transcription factor binding sites
Stefan H. Lelieveld, Judith Schütte, Maurits J. J. Dijkstra et al. · Nucleic Acids Research
Open access |
31 Dec 2015 |
8 |
| 16 |
The CMV-Specific CD8+ T Cell Response Is Dominated by Supra-Public Clonotypes with High Generation Probabilities
Kilian Schober, Pim Fuchs, Jonas Mir et al. · Pathogens
Open access |
13 Aug 2020 |
5 |
| 17 |
InSilicoSeq 2.0: Simulating realistic amplicon-based sequence reads
Stefan H. Lelieveld, Thijs Maas, Tessa C. X. Duk et al. · bioRxiv (Cold Spring Harbor Laboratory)
PreprintOpen access |
18 Feb 2024 |
4 |
| 18 |
Proteomic Profiling of Mouse Helper T Cell Differentiation
Henk‐Jan van den Ham, Nadine A. Binai, Fatiha Zaaraoui‐Boutahar et al. · PROTEOMICS
Open access |
13 Feb 2019 |
2 |
| 19 |
Comparison of sequence- and structure-based antibody clustering approaches on simulated repertoire sequencing data
Katharina Waury, Stefan H. Lelieveld, Sanne Abeln et al. · PLoS Computational Biology
Open access |
30 May 2025 |
1 |
| 20 |
Optimal planning of electrolyzers in distribution grids as a solution to grid congestion? A real-world case study in the Netherlands
Rik Koenen, Thomas Swarts, Johan Morren · Energy Conversion and Management X
Open access |
14 May 2026 |
0 |
| 21 |
Monitoring the effect of immunomodulatory treatment on the immune repertoire using the IGX platform
Pim Fuchs, Hwa-Yong Ham, Nuray Akyüz et al. · European Journal of Cancer
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Mar 2019 |
0 |