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Most cited papers from Genome Research Foundation

Genome Research Foundation

What are the most cited papers from Genome Research Foundation?

The most cited paper from Genome Research Foundation is "GENT2: an updated gene expression database for normal and tumor tissues" (Seung-Jin Park, Byoung-Ha Yoon, Seon‐Kyu Kim et al., 2019), with 520 citations. Next come "The type I interferon response in COVID-19: implications for treatment" (465) and "Genomes of coral dinoflagellate symbionts highlight evolutionary adaptations conducive to a symbiotic lifestyle" (415).

Showing 50 of 60 papers. Every paper with more than 62 citations is listed.

Most cited papers, sortable by citations and release date
#Paper
1 GENT2: an updated gene expression database for normal and tumor tissues Seung-Jin Park, Byoung-Ha Yoon, Seon‐Kyu Kim et al. · BMC Medical Genomics Open access Jul 2019 520
2 The type I interferon response in COVID-19: implications for treatment Jeong Seok Lee, Eui‐Cheol Shin · Nature reviews. Immunology Open access 12 Aug 2020 465
3 Genomes of coral dinoflagellate symbionts highlight evolutionary adaptations conducive to a symbiotic lifestyle Manuel Aranda, Ye Li, Yi Jin Liew et al. · Scientific Reports Open access 22 Dec 2016 415
4 Insights into the Evolution of Longevity from the Bowhead Whale Genome Michael P. Keane et al. · Cell Reports Open access 2015 406
5 Adiponectin Inhibits Cell Proliferation by Interacting with Several Growth Factors in an Oligomerization-dependent Manner Yu Wang, Karen S.L. Lam, Jian Yu Xu et al. · Journal of Biological Chemistry Open access 26 Feb 2005 384
6 Nicotinamide Improves Aspects of Healthspan, but Not Lifespan, in Mice Sarah Jayne Mitchell et al. · Cell Metabolism Open access Mar 2018 343
7 The tiger genome and comparative analysis with lion and snow leopard genomes Yun Sung Cho et al. · Nature Communications Open access 17 Sep 2013 332
8 Minke whale genome and aquatic adaptation in cetaceans Hyung‐Soon Yim et al. · Nature Genetics Open access 24 Nov 2013 305
9 Three-Dimensional Human Alveolar Stem Cell Culture Models Reveal Infection Response to SARS-CoV-2 Jeonghwan Youk et al. · Cell stem cell Open access 21 Oct 2020 279
10 TLR4 (toll-like receptor 4) activation suppresses autophagy through inhibition of FOXO3 and impairs phagocytic capacity of microglia Ji‐Won Lee, Hyeri Nam, Leah Eunjung Kim et al. · Autophagy Open access 7 Dec 2018 271
11 PD-1-Expressing SARS-CoV-2-Specific CD8+ T Cells Are Not Exhausted, but Functional in Patients with COVID-19 Min‐Seok Rha et al. · Immunity Open access 15 Dec 2020 248
12 A public resource facilitating clinical use of genomes Mad Price Ball et al. · Proceedings of the National Academy of Sciences Open access 13 Jul 2012 247
13 Prediction of phosphorylation sites using SVMs Jong Hun Kim, Ju‐Young Lee, Bermseok Oh et al. · Bioinformatics Jul 2004 245
14 Construction and Analysis of a Human-Chimpanzee Comparative Clone Map Asao Fujiyama, Hidemi Watanabe, Atsushi Toyoda et al. · Science 4 Jan 2002 245
15 DNA sequence and comparative analysis of chimpanzee chromosome 22 H. Watanabe et al. · Nature Open access May 2004 226
16 The Genetic Basis of White Tigers Xiao Jing Xu, Gui-Xin Dong, Xuesong Hu et al. · Current Biology Open access 23 May 2013 215
17 Recent advances in the CRISPR genome editing tool set Su Bin Moon, Do Yon Kim, Do Yon Kim et al. · Experimental & Molecular Medicine Open access Nov 2019 205
18 Dlx5 Specifically Regulates Runx2 Type II Expression by Binding to Homeodomain-response Elements in the Runx2 Distal Promoter Mi‐Hye Lee, Youn Jeong Kim, Won‐Joon Yoon et al. · Journal of Biological Chemistry Open access 23 Aug 2005 199
19 Highly efficient genome editing by CRISPR-Cpf1 using CRISPR RNA with a uridinylate-rich 3′-overhang Su Bin Moon, Jeong Mi Lee, Jeong Gu Kang et al. · Nature Communications Open access 3 Sep 2018 198
20 Genome-wide association study identifies NRG1 as a susceptibility locus for Hirschsprung's disease María-Mercé García-Barceló et al. · Proceedings of the National Academy of Sciences Open access 7 Feb 2009 190
21 Antioxidant activities of distiller dried grains with solubles as protein films containing tea extracts and their application in the packaging of pork meat Hyun‐Ju Yang, Ji-Hyeon Lee, Misun Won et al. · Food Chemistry 8 Sep 2015 165
22 Establishment of a near‐standard two‐dimensional human urine proteomic map Jisun Oh, Jaehoon Pyo, Eun‐Hyun Jo et al. · PROTEOMICS Nov 2004 162
23 Comparison of carnivore, omnivore, and herbivore mammalian genomes with a new leopard assembly Soonok Kim et al. · Genome biology Open access 11 Oct 2016 155
24 Clonal dynamics in early human embryogenesis inferred from somatic mutation Seongyeol Park et al. · Nature 25 Aug 2021 152
25 Genome-wide association study identifies a susceptibility locus for biliary atresia on 10q24.2 María-Mercé García-Barceló et al. · Human Molecular Genetics Open access 11 May 2010 148
26 Capsicum annuumWRKY protein CaWRKY1 is a negative regulator of pathogen defense Sang‐Keun Oh, Kwang‐Hyun Baek, Jeong Mee Park et al. · New Phytologist 20 Dec 2007 147
27 Korean Genome Project: 1094 Korean personal genomes with clinical information Sungwon Jeon et al. · Science Advances Open access 27 May 2020 145
28 The Feasibility Study of Non-Invasive Fetal Trisomy 18 and 21 Detection with Semiconductor Sequencing Platform Young Joo Jeon, Yulin Zhou, Yihan Li et al. · PLoS ONE Open access 20 Oct 2014 140
29 Comparison between MGI and Illumina sequencing platforms for whole genome sequencing Sol A Jeon, Jong‐Lyul Park, Seung‐Jin Park et al. · Genes & Genomics 17 Apr 2021 130
30 Cigarette smoking is an independent risk factor for type 2 diabetes: a four‐year community‐based prospective study Nam H. Cho, Juliana C.N. Chan, Hak Chul Jang et al. · Clinical Endocrinology 30 Mar 2009 123
31 Improving CRISPR Genome Editing by Engineering Guide RNAs Su Bin Moon, Do Yon Kim, Do Yon Kim et al. · Trends in biotechnology Review 4 Mar 2019 103
32 Epigenetic inactivation of protein kinase D1 in gastric cancer and its role in gastric cancer cell migration and invasion Moonkoo Kim, Hay-Ran Jang, Jeong‐Hoon Kim et al. · Carcinogenesis Open access 4 Oct 2007 95
33 A Snapshot of the Emerging Tomato Genome Sequence Lukas A. Mueller et al. · The Plant Genome Open access140 authors Mar 2009 94
34 Capsicum annuumCCR4‐associated factorCaCAF1is necessary for plant development and defence response Sujon Sarowar, Hyun Woo Oh, Hye Sun Cho et al. · The Plant Journal Open access 21 Jun 2007 92
35 An ethnically relevant consensus Korean reference genome is a step towards personal reference genomes Yun Sung Cho, Hyunho Kim, Hak‐Min Kim et al. · Nature Communications Open access 24 Nov 2016 90
36 Functional Proteomics Study Reveals That N-Acetylglucosaminyltransferase V Reinforces the Invasive/Metastatic Potential of Colon Cancer through Aberrant Glycosylation on Tissue Inhibitor of Metalloproteinase- Yong-Sam Kim, Soo Young Hwang, Hye‐Yeon Kang et al. · Molecular & Cellular Proteomics Open access 18 Sep 2007 90
37 Disulfiram Treatment Normalizes Body Weight in Obese Mice Michel Bernier et al. · Cell Metabolism Open access 14 May 2020 89
38 Mutational spectrum of SARS-CoV-2 during the global pandemic Kijong Yi, Su Yeon Kim, Thomas Bleazard et al. · Experimental & Molecular Medicine Open access Aug 2021 88
39 Whole transcriptome analyses of six thoroughbred horses before and after exercise using RNA-Seq Kyung‐Do Park et al. · BMC Genomics Open access 12 Sep 2012 87
40 nc886, a non-coding RNA of anti-proliferative role, is suppressed by CpG DNA methylation in human gastric cancer Kwang-Soo Lee, Kwang-Soo Lee, Jong‐Lyul Park et al. · Oncotarget Open access 31 May 2014 84
41 Comparative analysis of 7 short-read sequencing platforms using the Korean Reference Genome: MGI and Illumina sequencing benchmark for whole-genome sequencing Hak‐Min Kim, Sungwon Jeon, Oksung Chung et al. · GigaScience Open access Mar 2021 81
42 RhoB induces apoptosis via direct interaction with TNFAIP1 in HeLa cells Dong‐Myung Kim, Kyung‐Sook Chung, Shin‐Jung Choi et al. · International Journal of Cancer 2 Jun 2009 80
43 Depression and suicide risk prediction models using blood-derived multi-omics data Youngjune Bhak, Hyoung-oh Jeong, Yun Sung Cho et al. · Translational Psychiatry Open access 17 Oct 2019 79
44 Interaction of tankyrase and peroxiredoxin II is indispensable for the survival of colorectal cancer cells Dong Hoon Kang, Doo Jae Lee, Sunmi Lee et al. · Nature Communications Open access 21 Jun 2017 78
45 nc886 is induced by TGF-β and suppresses the microRNA pathway in ovarian cancer Ji‐Hye Ahn, Hyun‐Sung Lee, Ju‐Seog Lee et al. · Nature Communications Open access 15 Mar 2018 76
46 Genomic profile analysis of diffuse-type gastric cancers Yeon-Su Lee et al. · Genome biology Open access Apr 2014 76
47 Short‐term calorie restriction ameliorates genomewide, age‐related alterations in DNA methylation Chul Hong Kim, Eun Kyeong Lee, Yeon Ja Choi et al. · Aging Cell Open access 25 Aug 2016 73
48 Molecular and biochemical characterization of the Capsicum annuum calcium-dependent protein kinase�3 (CaCDPK3) gene induced by abiotic and biotic stresses Eunsook Chung, Jeong Mee Park, Sang‐Keun Oh et al. · Planta 23 Sep 2004 73
49 Whole-genome, transcriptome, and methylome analyses provide insights into the evolution of platycoside biosynthesis in Platycodon grandiflorus, a medicinal plant Jung‐Eun Kim et al. · Horticulture Research Open access 30 Jun 2020 72
50 Single-cell transcriptome of bronchoalveolar lavage fluid reveals sequential change of macrophages during SARS-CoV-2 infection in ferrets Jeong Seok Lee, June‐Young Koh, Kijong Yi et al. · Nature Communications Open access 27 Jul 2021 70

Citations are OpenAlex's own counts, from its 2026-09-23 snapshot, so the ranking can differ from Google Scholar or Web of Science. A paper is listed for an institution when any of its authors gave it as an affiliation; retracted papers and papers whose citation count cannot be traced to citing works are left out, and a preprint and the article it became are shown once. Release dates are OpenAlex's: where a source gave only a month or a year, that is what is shown. How the lists are chosen.