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Institution · Molecular Networks (Germany)

Most cited papers from Molecular Networks (Germany)

Molecular Networks (Germany)

What are the most cited papers from Molecular Networks (Germany)?

The most cited paper from Molecular Networks (Germany) is "QSAR Modeling: Where Have You Been? Where Are You Going To?" (Artem R Cherkasov, Eugene N. Muratov, Denis Fourches et al., 2013), with 2,178 citations. Next come "Sodium chloride drives autoimmune disease by the induction of pathogenic TH17 cells" (1,405) and "ToxCast Chemical Landscape: Paving the Road to 21st Century Toxicology" (725).

Showing 50 of 61 papers. Every paper with more than 21 citations is listed.

Most cited papers, sortable by citations and release date
#Paper
1 QSAR Modeling: Where Have You Been? Where Are You Going To? Artem R Cherkasov, Eugene N. Muratov, Denis Fourches et al. · Journal of Medicinal Chemistry Open access 18 Dec 2013 2,178
2 Sodium chloride drives autoimmune disease by the induction of pathogenic TH17 cells Markus Kleinewietfeld, Arndt Manzel, Jens Marc Titze et al. · Nature Open access 5 Mar 2013 1,405
3 ToxCast Chemical Landscape: Paving the Road to 21st Century Toxicology Ann M. Richard, Richard Judson, Keith A. Houck et al. · Chemical Research in Toxicology Open access Jul 2016 725
4 Online chemical modeling environment (OCHEM): web platform for data storage, model development and publishing of chemical information Iurii Sushko et al. · Journal of Computer-Aided Molecular Design Open access Jun 2011 701
5 The Tox21 10K Compound Library: Collaborative Chemistry Advancing Toxicology Ann M. Richard et al. · Chemical Research in Toxicology Open access 3 Nov 2020 328
6 JSME: a free molecule editor in JavaScript Bruno Bienfait, Peter F. Ertl · Journal of Cheminformatics Open access 21 May 2013 324
7 The canonical Wnt signalling pathway and its APC partner in colon cancer development Jean Schneikert, Jürgen Behrens · Gut Open access 14 Jul 2006 293
8 Small extracellular vesicles and their miRNA cargo are anti-apoptotic members of the senescence-associated secretory phenotype Lucia Terlecki‐Ζaniewicz, Ingo Lämmermann, Julie Latreille et al. · Aging Open access 19 May 2018 252
9 Identification of New Functional Inhibitors of Acid Sphingomyelinase Using a Structure−Property−Activity Relation Model Johannes Kornhuber, Philipp Tripal, Martin Reichel et al. · Journal of Medicinal Chemistry 21 Nov 2007 229
10 New Publicly Available Chemical Query Language, CSRML, To Support Chemotype Representations for Application to Data Mining and Modeling Chihae Yang, Aleksey Tarkhov, Jörg Marusczyk et al. · Journal of Chemical Information and Modeling 3 Feb 2015 204
11 The Wnt connection to tumorigenesis Jürgen Behrens, Barbara Lustig · The International Journal of Developmental Biology Open access 2004 203
12 Identification of Novel Functional Inhibitors of Acid Sphingomyelinase Johannes Kornhuber, Markus Muehlbacher, Stefan Trapp et al. · PLoS ONE Open access 31 Aug 2011 183
13 Improvement of quantitative structure–activity relationship (QSAR) tools for predicting Ames mutagenicity: outcomes of the Ames/QSAR International Challenge Project Masamitsu Honma et al. · Mutagenesis Open access 20 Sep 2018 149
14 Effects of Cold Atmospheric Plasma (CAP) on ß-Defensins, Inflammatory Cytokines, and Apoptosis-Related Molecules in Keratinocytes In Vitro and In Vivo Stephanie Arndt, Michael Landthaler, Julia Luise Zimmermann et al. · PLoS ONE Open access 13 Mar 2015 141
15 Conformations and 3D pharmacophore searching Christof H. Schwab · Drug Discovery Today Technologies 17 Nov 2010 138
16 Thresholds of Toxicological Concern for cosmetics-related substances: New database, thresholds, and enrichment of chemical space Chihae Yang, SUSAN M. BARLOW, KRISTI L. MULDOON JACOBS et al. · Food and Chemical Toxicology Open access Sep 2017 118
17 Molecular fingerprint-derived similarity measures for toxicological read-across: Recommendations for optimal use Claire L. Mellor, Richard Marchese Robinson, Romualdo Benigni et al. · Regulatory Toxicology and Pharmacology 20 Nov 2018 113
18 Ligand-Based Models for the Isoform Specificity of Cytochrome P450 3A4, 2D6, and 2C9 Substrates Lothar Terfloth, Bruno Bienfait, Johann Gasteiger · Journal of Chemical Information and Modeling Jul 2007 92
19 Safer chemicals using less animals: kick-off of the European ONTOX project Mathieu Vinken et al. · Toxicology Open access Jun 2021 84
20 Improving the Charge Transport in Self-Assembled Monolayer Field-Effect Transistors: From Theory to Devices Christof Martin Jäger, Thomas Schmaltz, Michael Anthony Novak et al. · Journal of the American Chemical Society 12 Mar 2013 75
21 Legacy data sharing to improve drug safety assessment: the eTOX project eTOX et al. · Nature Reviews Drug Discovery Open access 13 Oct 2017 72
22 EFSA’s OpenFoodTox: An open source toxicological database on chemicals in food and feed and its future developments J.L.C.M. Dorne et al. · Environment International Open access 8 Dec 2020 70
23 The eTOX Data-Sharing Project to Advance in Silico Drug-Induced Toxicity Prediction Montserrat Cases, Katharine A. Briggs, Thomas Steger‐Hartmann et al. · International Journal of Molecular Sciences Open access 14 Nov 2014 66
24 Truncated APC regulates the transcriptional activity of β-catenin in a cell cycle dependent manner Jean Schneikert, Annette Grohmann, Jürgen Behrens · Human Molecular Genetics 22 Dec 2006 61
25 Functional definition of the mutation cluster region of adenomatous polyposis coli in colorectal tumours Ε. M. Kohler, A. Derungs, G�nther Daum et al. · Human Molecular Genetics 12 Mar 2008 58
26 Inroads to Predict in Vivo Toxicology—An Introduction to the eTOX Project Katharine A. Briggs, Montserrat Cases, David J. Heard et al. · International Journal of Molecular Sciences Open access 21 Mar 2012 56
27 -Catenin degradation mediated by the CID domain of APC provides a model for the selection of APC mutations in colorectal, desmoid and duodenal tumours Ε. M. Kohler, Shree Harsha Vijaya Chandra, Jürgen Behrens et al. · Human Molecular Genetics 15 Oct 2008 52
28 A review of in silico toxicology approaches to support the safety assessment of cosmetics-related materials M Cronin, Steven J. Enoch, Judith Clare Madden et al. · Computational Toxicology Open access 7 Jan 2022 51
29 Interactions of 2,3‐benzodiazepines and cydothiazide at AMPA receptors: patch clamp recordings in cultured neurones and area CA1 in hippocampal slices Gerhard Rammes, Dieter Swandulla, Graham L. Collingridge et al. · British Journal of Pharmacology Open access Mar 1996 51
30 Virtual screening applications: a study of ligand-based methods and different structure representations in four different scenarios Dimitar Hristozov, Tudor Ionel Oprea, Johann Gasteiger · Journal of Computer-Aided Molecular Design Oct 2007 51
31 Comparison of Multilabel and Single-Label Classification Applied to the Prediction of the Isoform Specificity of Cytochrome P450 Substrates Lisa Michielan, Lothar Terfloth, Johann Gasteiger et al. · Journal of Chemical Information and Modeling 2 Nov 2009 50
32 Combining Chemoinformatics with Bioinformatics: In Silico Prediction of Bacterial Flavor-Forming Pathways by a Chemical Systems Biology Approach “Reverse Pathway Engineering” Mengjin Liu, Bruno Bienfait, Oliver Sacher et al. · PLoS ONE Open access 8 Jan 2014 49
33 Enabling the exploration of biochemical pathways Martin Reitz, Oliver Sacher, Aleksey Tarkhov et al. · Organic & Biomolecular Chemistry 2004 49
34 Correlations between anti-müllerian hormone, inhibin B, and activin A in follicular fluid in IVF/ICSI patients for assessing the maturation and developmental potential of oocytes. Susanne Cupisti, Ralf Dittrich, Arnd Mueller et al. · PubMed 14 Dec 2007 49
35 Uncovering metabolic pathways relevant to phenotypic traits of microbial genomes Gabi Kastenmüller, Mark Schenk, Johann Gasteiger et al. · Genome biology Open access 10 Mar 2009 47
36 Eosinophils are not essential for maintenance of murine plasma cells in the bone marrow Konrad Haberland, Jochen A. Ackermann, Natacha Ipseiz et al. · European Journal of Immunology 14 Feb 2018 46
37 Impact of Conformational Flexibility on Three-Dimensional Similarity Searching Using Correlation Vectors Steffen Renner, Christof H. Schwab, Johann Gasteiger et al. · Journal of Chemical Information and Modeling 8 Aug 2006 46
38 Origin of the TTC values for compounds that are genotoxic and/or carcinogenic and an approach for their re-evaluation Alan R. Boobis, Paul Joseph Brown, M Cronin et al. · Critical Reviews in Toxicology Open access 16 May 2017 45
39 β6‐integrin serves as a novel serum tumor marker for colorectal carcinoma Susan Bengs et al. · International Journal of Cancer Open access 17 Jan 2019 41
40 Synthesis and evaluation of new guanidine-thiourea organocatalyst for the nitro-Michael reaction: Theoretical studies on mechanism and enantioselectivity Tatyana E. Shubina, Matthias Freund, Sebastian Schenker et al. · Beilstein Journal of Organic Chemistry Open access 7 Sep 2012 39
41 Dempster-Shafer theory for combining in silico evidence and estimating uncertainty in chemical risk assessment James F. Rathman, Chihae Yang, Hao Zhou · Computational Toxicology 23 Mar 2018 35
42 Characterizing the BMAP/MAP/1 Departure Process via the ETAQA Truncation Qi Zhang, Armin Heindl, Evgenia Smirni · Stochastic Models 2005 35
43 A New CSRML Structure-Based Fingerprint Method for Profiling and Categorizing Per- and Polyfluoroalkyl Substances (PFAS) Ann M. Richard, Ryan R. Lougee, Matthew S. Adams et al. · Chemical Research in Toxicology Open access 2 Mar 2023 34
44 Effects of strength exercise interventions on activities of daily living, motor performance, and physical activity in children and adolescents with leukemia or non-Hodgkin lymphoma: Results from the randomized controlled ActiveADL Study Dominik Gaser, Christiane Peters, Renate Oberhoffer et al. · Frontiers in Pediatrics Open access 8 Nov 2022 33
45 Unlocking the potential of in silico chemical safety assessment – A report on a cross-sector symposium on current opportunities and future challenges M Cronin, Judith Clare Madden, Chihae Yang et al. · Computational Toxicology Open access 18 Dec 2018 33
46 Robust modelling of solubility in supercritical carbon dioxide using Bayesian methods Anna Tarasova, Frank R. Burden, Johann Gasteiger et al. · Journal of Molecular Graphics and Modelling 17 Dec 2009 31
47 Automatic Determination of Reaction Mappings and Reaction Center Information. 2. Validation on a Biochemical Reaction Database Joannis Apostolakis, Oliver Sacher, Robert Körner et al. · Journal of Chemical Information and Modeling Jun 2008 31
48 An oomycete NLP cytolysin forms transient small pores in lipid membranes Katja Pirc, Luke A. Clifton, Neval Yilmaz et al. · Science Advances Open access 11 Mar 2022 29
49 Second-generation de novo design: a view from a medicinal chemist perspective Andrea Zaliani, Krisztina Boda, Thomas Seidel et al. · Journal of Computer-Aided Molecular Design 26 Jun 2009 28
50 ZEB1-mediated fibroblast polarization controls inflammation and sensitivity to immunotherapy in colorectal cancer Constantin Menche et al. · EMBO Reports Open access 27 Jun 2024 27

Citations are OpenAlex's own counts, from its 2026-09-23 snapshot, so the ranking can differ from Google Scholar or Web of Science. A paper is listed for an institution when any of its authors gave it as an affiliation; retracted papers and papers whose citation count cannot be traced to citing works are left out, and a preprint and the article it became are shown once. Release dates are OpenAlex's: where a source gave only a month or a year, that is what is shown. How the lists are chosen.