Most cited papers from Ribocon (Germany)

Ribocon (Germany)

What are the most cited papers from Ribocon (Germany)?

The most cited paper from Ribocon (Germany) is "JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison" (Michael Richter, Ramon A. Rossello-Mora, Frank Oliver Glöckner et al., 2015), with 3,022 citations. Next come "Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota" (2,667) and "Substrate-Controlled Succession of Marine Bacterioplankton Populations Induced by a Phytoplankton Bloom" (1,500).

Published TypeFieldAccessAuthorsCitations

Showing 50 of 67 papers. Every paper is listed.

Most cited papers, sortable by citations and release date
#	Paper
1	JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison Michael Richter, Ramon A. Rossello-Mora, Frank Oliver Glöckner et al. · Bioinformatics Open access	16 Nov 2015	3,022
2	Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota Davide Bulgarelli, Matthias Rott, Klaus Schlaeppi et al. · Nature	31 Jul 2012	2,667
3	Substrate-Controlled Succession of Marine Bacterioplankton Populations Induced by a Phytoplankton Bloom Hanno Teeling et al. · Science	3 May 2012	1,500
4	25 years of serving the community with ribosomal RNA gene reference databases and tools Frank Oliver Glöckner, Pelin Yilmaz, Christian Quast et al. · Journal of Biotechnology Open access	23 Jun 2017	1,034
5	The All-Species Living Tree project: A 16S rRNA-based phylogenetic tree of all sequenced type strains Pablo Yarza, Michael Richter, Jörg Peplies et al. · Systematic and Applied Microbiology Open access	10 Aug 2008	950
6	Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications Pelin Yilmaz et al. · Nature Biotechnology Open access	May 2011	834
7	A vaccine targeting mutant IDH1 induces antitumour immunity Theresa Schumacher et al. · Nature	25 Jun 2014	712
8	Predominant archaea in marine sediments degrade detrital proteins Karen G. Lloyd, Lars Schreiber, Dorthe Groth Petersen et al. · Nature	26 Mar 2013	590
9	Single-cell genomics reveals the lifestyle of Poribacteria , a candidate phylum symbiotically associated with marine sponges Alexander Siegl, Janine Kamke, Thomas Hochmuth et al. · The ISME Journal Open access	8 Jul 2010	283
10	Microbiota from the distal guts of lean and obese adolescents exhibit partial functional redundancy besides clear differences in community structure Manuel Ferrer, Alicia Ruiz-Rodriguez, Francesca Lanza et al. · Environmental Microbiology Open access	23 Jul 2012	250
11	Diverse sulfate-reducing bacteria of the Desulfosarcina/Desulfococcus clade are the key alkane degraders at marine seeps Sara Kleindienst, Florian‐Alexander Herbst, Marion H. Stagars et al. · The ISME Journal Open access	10 Apr 2014	232
12	Statin therapy causes gut dysbiosis in mice through a PXR-dependent mechanism Jose Antonio Caparros-Martin, Ricky R. Lareu, Joshua P. Ramsay et al. · Microbiome Open access	9 Aug 2017	218
13	Expanding the World of Marine Bacterial and Archaeal Clades Pelin Yilmaz, Pablo Yarza, Josephine Z. Rapp et al. · Frontiers in Microbiology Open access	8 Jan 2016	195
14	Microbial and Chemical Characterization of Underwater Fresh Water Springs in the Dead Sea Danny Ionescu, Christian Siebert, Lùbos Polerecký et al. · PLoS ONE Open access	5 Jun 2012	168
15	Roadmap for naming uncultivated Archaea and Bacteria Alison E. Murray et al. · Nature Microbiology Open access	8 Jun 2020	159
16	Defining the critical hurdles in cancer immunotherapy Bernard A. Fox et al. · Journal of Translational Medicine Open access105 authors	Dec 2011	154
17	Single‐cell analysis reveals a novel uncultivated magnetotactic bacterium within the candidate division OP3 Sebastian Kolinko, Christian Jogler, Emanuel Katzmann et al. · Environmental Microbiology	18 Oct 2011	151
18	Bacterial communities associated with four ctenophore genera from the German Bight (North Sea) Wenjin Hao, Gunnar Gerdts, Jörg Peplies et al. · FEMS Microbiology Ecology Open access	5 Dec 2014	150
19	Meeting report: GenBank microbial genomic taxonomy workshop (12–13 May, 2015) Scott Federhen et al. · Standards in Genomic Sciences Open access	9 Feb 2016	114
20	X‐ray crystallography study on ribosome recycling: the mechanism of binding and action of RRF on the 50S ribosomal subunit Daniel N. Wilson, Frank Schluenzen, Joerg M. Harms et al. · The EMBO Journal Open access	23 Dec 2004	108
21	Bacterial population and biodegradation potential in chronically crude oil-contaminated marine sediments are strongly linked to temperature Rafael Bargiela et al. · Scientific Reports Open access	29 Jun 2015	107
22	A standard operating procedure for phylogenetic inference (SOPPI) using (rRNA) marker genes Jörg Peplies, Renzo Kottmann, Wolfgang Ludwig et al. · Systematic and Applied Microbiology	Sep 2008	106
23	Microbial stratification in low pH oxic and suboxic macroscopic growths along an acid mine drainage Celia Méndez–García, Victoria Mesa, Richard R. Sprenger et al. · The ISME Journal Open access	16 Jan 2014	105
24	SILVA in 2026: a global core biodata resource for rRNA within the DSMZ digital diversity Maria S. Chuvochina, Jan Gerken, Martinique Frentrup et al. · Nucleic Acids Research Open access	18 Nov 2025	98
25	Release LTP_12_2020, featuring a new ARB alignment and improved 16S rRNA tree for prokaryotic type strains Wolfgang Ludwig, Tomeu Viver, Ralf Westram et al. · Systematic and Applied Microbiology Open access	24 May 2021	92
26	Diversity and activity of marine bacterioplankton during a diatom bloom in the North Sea assessed by total RNA and pyrotag sequencing Anna Klindworth, Alexander J. Mann, Sixing Huang et al. · Marine Genomics Open access	6 Sep 2014	91
27	Factors affecting escape distances of staging waterbirds Karsten Laursen, Johnny A. Kahlert, John Frikke · Wildlife Biology Open access	Mar 2005	80
28	New insights into Oculina patagonica coral diseases and their associated Vibrio spp. communities Esther Rubio‐Portillo, Pablo Yarza, Cindy Peñalver et al. · The ISME Journal Open access	13 Mar 2014	79
29	Bacterial community dynamics in a cooling tower with emphasis on pathogenic bacteria and Legionella species using universal and genus-specific deep sequencing Rui P. A. Pereira, Jörg Peplies, Manfred G. Höfle et al. · Water Research	6 Jun 2017	66
30	The low diverse gastric microbiome of the jellyfish Cotylorhiza tuberculata is dominated by four novel taxa Tomeu Viver, Luis H. Orellana, Janet K. Hatt et al. · Environmental Microbiology Open access	17 Apr 2017	64
31	A phylogenetic framework for the kingdom Fungi based on 18S rRNA gene sequences Pablo Yarza, Pelin Yilmaz, Katrin Panzer et al. · Marine Genomics Open access	Jun 2017	60
32	A methodological framework to enhance the clinical success of cancer immunotherapy Axel Hoos, Cedrik Michael Britten, Christoph Huber et al. · Nature Biotechnology	Oct 2011	60
33	JCoast – A biologist-centric software tool for data mining and comparison of prokaryotic (meta)genomes Michael Richter, Thierry Lombardot, Ivaylo Kostadinov et al. · BMC Bioinformatics Open access	Apr 2008	57
34	The immuno-oncology framework Axel Hoos, Cedrik Michael Britten · OncoImmunology Open access	May 2012	53
35	Metaproteogenomic Profiling of Microbial Communities Colonizing Actively Venting Hydrothermal Chimneys Petra Pjevac, Dimitri V. Meier, Stephanie Markert et al. · Frontiers in Microbiology Open access	6 Apr 2018	45
36	Microbial lipids reveal carbon assimilation patterns on hydrothermal sulfide chimneys Eoghan P. Reeves, Marcos Yukio Yoshinaga, Petra Pjevac et al. · Environmental Microbiology	6 Jun 2014	44
37	Development of a genus-specific next generation sequencing approach for sensitive and quantitative determination of the Legionella microbiome in freshwater systems Rui P. A. Pereira, Jörg Peplies, Ingrid Brettar et al. · BMC Microbiology Open access	30 Mar 2017	40
38	Genomic diversity within the haloalkaliphilic genus Thioalkalivibrio Anne‐Catherine Ahn, Jan P. Meier‐Kolthoff, Lex Overmars et al. · PLoS ONE Open access	10 Mar 2017	39
39	Microbial changes in periodontitis successfully treated by mechanical plaque removal and systemic amoxicillin and metronidazole Giuseppe Valenza, Simone Veihelmann, Jörg Peplies et al. · International Journal of Medical Microbiology	16 May 2009	36
40	Confidence-based Somatic Mutation Evaluation and Prioritization Martin Löwer, Bernhard Y. Renard, Jos de Graaf et al. · PLoS Computational Biology Open access	27 Sep 2012	33
41	Close association of active nitrifiers with B eggiatoa mats covering deep‐sea hydrothermal sediments Matthias Winkel, Dirk de Beer, Gaute Lavik et al. · Environmental Microbiology	29 Oct 2013	33
42	Chemistry and applications of oligonucleotide analogues Brian S. Sproat · Journal of Biotechnology	Jul 1995	31
43	Identification and phylogeny of eukaryotic 18S rDNA phylotypes detected in chlorinated finished drinking water samples from three Parisian surface water treatment plants Jean-Baptiste Poitelon, Marc Joyeux, B. Welté et al. · Letters in Applied Microbiology	7 Aug 2009	31
44	The synthesis of isopropylidene mRNA cap analogs modified with phosphorothioate moiety and their evaluation as promoters of mRNA translation Marcin Warmiński, Joanna Kowalska, Janina Buck et al. · Bioorganic & Medicinal Chemistry Letters	9 May 2013	25
45	Pseudomonas-Specific NGS Assay Provides Insight Into Abundance and Dynamics of Pseudomonas Species Including P. aeruginosa in a Cooling Tower Rui P. A. Pereira, Jörg Peplies, Douglas Mushi et al. · Frontiers in Microbiology Open access	21 Aug 2018	24
46	Gene Sets for Utilization of Primary and Secondary Nutrition Supplies in the Distal Gut of Endangered Iberian Lynx María M. Alcaide, Enzo Messina, Michael Richter et al. · PLoS ONE Open access	12 Dec 2012	24
47	Bile Acid Signal Molecules Associate Temporally with Respiratory Inflammation and Microbiome Signatures in Clinically Stable Cystic Fibrosis Patients Stephanie Flynn, F. Jerry Reen, Jose Antonio Caparros-Martin et al. · Microorganisms Open access	6 Nov 2020	20
48	Hydrobacter penzbergensis gen. nov., sp. nov., isolated from purified water Wolfgang Eder, Jörg Peplies, Gerhard Wanner et al. · INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY	7 Jan 2015	18
49	Proceedings of the international workshop on Ribosomal RNA technology, April 7–9, 2008, Bremen, Germany Linda Amaral‐Zettler, Jörg Peplies, Alban Ramette et al. · Systematic and Applied Microbiology	Sep 2008	15
50	Differential clearance rates of microbial phylotypes by four appendicularian species Ayelet Dadon‐Pilosof, Keats R. Conley, Fabien Lombard et al. · Marine Ecology Progress Series	19 Dec 2022	12

Citations are OpenAlex's own counts, from its 2026-09-23 snapshot, so the ranking can differ from Google Scholar or Web of Science. A paper is listed for an institution when any of its authors gave it as an affiliation; retracted papers and papers whose citation count cannot be traced to citing works are left out, and a preprint and the article it became are shown once. Release dates are OpenAlex's: where a source gave only a month or a year, that is what is shown. How the lists are chosen.