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Most cited papers from The Carpentries

What are the most cited papers from The Carpentries?

The most cited paper from The Carpentries is "Community Organizations: Changing the Culture in Which Research Software Is Developed and Sustained" (Daniel S. Katz, Lois Curfman McInnes, David E. Bernholdt et al., 2018), with 48 citations. Next come "CyVerse: Cyberinfrastructure for open science" (39) and "Making Common Fund data more findable: catalyzing a data ecosystem" (27).

Showing 32 of 32 papers. Every paper is listed.

Most cited papers, sortable by citations and release date
#Paper
1 Community Organizations: Changing the Culture in Which Research Software Is Developed and Sustained Daniel S. Katz, Lois Curfman McInnes, David E. Bernholdt et al. · Computing in Science & Engineering Open access 7 Dec 2018 48
2 CyVerse: Cyberinfrastructure for open science Tyson L. Swetnam et al. · PLoS Computational Biology Open access 7 Feb 2024 39
3 Making Common Fund data more findable: catalyzing a data ecosystem Amanda L. Charbonneau et al. · GigaScience Open access 2022 27
4 Spontaneous and Fungicide-Induced Genomic Variation inSclerotinia sclerotiorum Nikita Gambhir, Zhian N. Kamvar, Rebecca S. Higgins et al. · Phytopathology 15 Dec 2020 27
5 An international consensus on effective, inclusive, and career-spanning short-format training in the life sciences and beyond Jason Williams et al. · PLoS ONE Open access 9 Nov 2023 16
6 Optimizing Short-format Training: an International Consensus on Effective, Inclusive, and Career-spanning Professional Development in the Life Sciences and Beyond Jason Williams et al. · bioRxiv (Cold Spring Harbor Laboratory) PreprintOpen access 13 Mar 2023 8
7 Foundational Competencies and Responsibilities of a Research Software Engineer: Current State and Suggestions for Future Directions Florian Goth et al. · F1000Research Open access 8 Sep 2025 5
8 Foundational Competencies and Responsibilities of a Research Software Engineer Florian Goth et al. · F1000Research Open access 26 Nov 2024 4
9 Prognosis of essential mixed cryoglobulinemia and connective tissue disease-related cryoglobulinemia after rituximab-induced remission Claire Poggi et al. · Lara D. Veeken 6 Jun 2025 3
10 Short-format Workshops Build Skills and Confidence for Researchers to Work with Data Kari L. Jordan, Marianne Corvellec, Elizabeth Wickes et al. Conference paperOpen access 10 Sep 2020 3
11 Scaling Up Data Literacy and Computing Skills Training in Biodiversity Science, Lessons Learned from The Carpentries François Michonneau, Deborah L Paul · Biodiversity Information Science and Standards Open access 18 Jun 2019 2
12 reconhub/projections: 0.5.1 Thibaut Jombart, Zhian N. Kamvar, Tim Taylor et al. · Spiral (Imperial College London) Open access 30 Jun 2020 1
13 Training to Protect Research Integrity in the Age of AI-assisted Coding Philippa Broadbent, T. Mark Hodges, Halford J. W. Dace et al. · Zenodo (CERN European Organization for Nuclear Research) Open access 9 Sep 2026 0
14 HPC Carpentry Jannetta S. Steyn, T. Mark Hodges · Zenodo (CERN European Organization for Nuclear Research) Open access Sep 2026 0
15 A Community-Owned Database Mapping dRTP Roles, Skills, and Training T. Mark Hodges, Samantha Jane Ahern, Jérémy Cohen et al. · Zenodo (CERN European Organization for Nuclear Research) Open access 9 Sep 2026 0
16 HPC Carpentry Jannetta S. Steyn, T. Mark Hodges · Zenodo (CERN European Organization for Nuclear Research) Open access Sep 2026 0
17 The Carpentries Instructor Tip Sheet SherAaron Hurt, Danielle Sieh, Brynn Elliott et al. · Zenodo (CERN European Organization for Nuclear Research) Open access 28 Aug 2026 0
18 The Carpentries Partnership Tip Sheet The Carpentries, A. Trusler, Kari L. Jordan et al. · Zenodo (CERN European Organization for Nuclear Research) Open access 13 Apr 2026 0
19 Please Gamble Responsibly: Training to Protect Research Integrity in the Age of AI-assisted Coding T. Mark Hodges, Amanda K. Kis, Magnus Hagdorn et al. · Zenodo (CERN European Organization for Nuclear Research) Open access 5 Mar 2026 0
20 The Carpentries Vitual CarpentryCon Handbook The Carpentries, Alycia Crall, A. Trusler et al. · Zenodo (CERN European Organization for Nuclear Research) Open access 13 Mar 2026 0
21 The Carpentries Welcome Tip Sheet Alycia Crall, Talisha Sutton-Kennedy, A. Trusler et al. · Zenodo (CERN European Organization for Nuclear Research) Open access 17 Feb 2026 0
22 The Carpentries Strategic Plan for 2026-2028 Kari Jordan, Erin Becker, T. Mark Hodges et al. · Zenodo (CERN European Organization for Nuclear Research) Open access 22 Jan 2026 0
23 Introduction to deep learning: Carpentries-style hands-on lesson material for introducing researchers to deep learning Sven A. van der Burg, Pranav Chandramouli, Anne Fouilloux et al. · Journal of Open Source Education Open access 2 Jan 2026 0
24 Future challenges for Research Software Engineering Goth, Florian, Castro, Leyla Jael, Chourdakis, Gerasimos et al. · Technische Universität Berlin – Universitätsbibliothek Open access 20 May 2025 0
25 The Carpentries Welcome Tip Sheet Crall, Alycia, Sutton-Kennedy, Talisha, Trusler, Angelique et al. · Zenodo (CERN European Organization for Nuclear Research) Open access 9 Dec 2025 0
26 Modular training resources for bioimage analysis Tischer, Christian, Politi, Antonio, Buchholz, Tim-Oliver et al. · Zenodo (CERN European Organization for Nuclear Research) PreprintOpen access 21 Nov 2025 0
27 The Carpentries Instructor Tip Sheet Hurt, SherAaron, Sieh, Danielle, Elliott, Brynn et al. · Zenodo (CERN European Organization for Nuclear Research) Open access 3 Nov 2025 0
28 Research software: A key (neglected) component of the digital research infrastructure ecosystem Anelda van der Walt, Kim Martin, Sumir Panji et al. · South African Journal of Science Open access 24 Nov 2025 0
29 The Carpentries: Programmatic Assessment Report: October 31, 2018 Maneesha Sane, Erin Becker · Zenodo (CERN European Organization for Nuclear Research) Open access 16 Dec 2018 0
30 The Carpentries: Teaching data science skills to researchers and people working in library- and information-related roles worldwide Christopher C. Erdmann, Natasha Simons · Figshare Open access 8 Feb 2019 0
31 mrc-ide/EpiEstim: 2.2-3 Anne Cori, Zhian N. Kamvar, Jake Stockwin et al. · Spiral (Imperial College London) Open access Jun 2020 0
32 LIBER Webinar: Library Carpentry – Teaching Data Science Skills & Upcoming Instructor Training Christopher C. Erdmann, Juliane Schneider, David A. Kane · Zenodo (CERN European Organization for Nuclear Research) Open access 8 Apr 2019 0

Citations are OpenAlex's own counts, from its 2026-09-23 snapshot, so the ranking can differ from Google Scholar or Web of Science. A paper is listed for an institution when any of its authors gave it as an affiliation; retracted papers and papers whose citation count cannot be traced to citing works are left out, and a preprint and the article it became are shown once. Release dates are OpenAlex's: where a source gave only a month or a year, that is what is shown. How the lists are chosen.