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Most cited papers from Third Wave Systems (United States)

What are the most cited papers from Third Wave Systems (United States)?

The most cited paper from Third Wave Systems (United States) is "CYP4F2 genetic variant alters required warfarin dose" (Michael D. Caldwell, Tarif A. Awad, Julie Ann Johnson et al., 2008), with 526 citations. Next come "Polymorphism identification and quantitative detection of genomic DNA by invasive cleavage of oligonucleotide probes" (490) and "A first-generation linkage disequilibrium map of human chromosome 22" (405).

Showing 50 of 60 papers. Every paper with more than 25 citations is listed.

Most cited papers, sortable by citations and release date
#Paper
1 CYP4F2 genetic variant alters required warfarin dose Michael D. Caldwell, Tarif A. Awad, Julie Ann Johnson et al. · Blood Open access 4 Feb 2008 526
2 Polymorphism identification and quantitative detection of genomic DNA by invasive cleavage of oligonucleotide probes Victor I. Lyamichev, Andrea L. Mast, Jeff G. Hall et al. · Nature Biotechnology Mar 1999 490
3 A first-generation linkage disequilibrium map of human chromosome 22 Elisabeth Dawson et al. · Nature Open access 10 Jul 2002 405
4 Myocardin Is a Critical Serum Response Factor Cofactor in the Transcriptional Program Regulating Smooth Muscle Cell Differentiation Kevin Lee Du, Hon S. Ip, Jian Li et al. · Molecular and Cellular Biology Open access 15 Mar 2003 364
5 HBsAg seroclearance in chronic hepatitis B in the Chinese: Virological, histological, and clinical aspects Man‐Fung Yuen, Danny Ka‐Ho Wong, Erwin Sablon et al. · Hepatology Open access 27 May 2004 244
6 Sensitive detection of DNA polymorphisms by the serial invasive signal amplification reaction Jeff G. Hall, Peggy S. Eis, Scott M. Law et al. · Proceedings of the National Academy of Sciences Open access 11 Jul 2000 239
7 The kinetics of oligonucleotide replacements Luis P. Reynaldo, Alexander V. Vologodskii, Bruce P Neri et al. · Journal of Molecular Biology Mar 2000 199
8 Quantitation of microRNAs using a modified Invader assay Hatim T. Allawi, James E. Dahlberg, Sarah M. Olson et al. · RNA Open access 18 Jun 2004 175
9 A Comparison of Eubacterial and Archaeal Structure-specific 5′-Exonucleases Michael W. Kaiser, Natasha Lyamicheva, Wu‐Po Ma et al. · Journal of Biological Chemistry Open access Jul 1999 159
10 Clinical, genetic, and pharmacogenetic applications of the invader assay* Robert W. Kwiatkowski, Victor I. Lyamichev, M DEARRUDA et al. · Molecular Diagnosis Dec 1999 141
11 Direct genetic analysis by matrix-assisted laser desorption/ionization mass spectrometry Timothy J. Griffin, Jeff G. Hall, James R. Prudent et al. · Proceedings of the National Academy of Sciences Open access 25 May 1999 138
12 Quantitation of covalently closed circular hepatitis B virus DNA in chronic hepatitis B patients Danny Ka‐Ho Wong, Man‐Fung Yuen, He‐Jun Yuan et al. · Hepatology Open access 30 Aug 2004 133
13 Safe Cycling: How Do Risk Perceptions Compare With Observed Risk? Meghan Winters, Shelina Babul, Harold Becker et al. · Canadian Journal of Public Health Open access Nov 2012 124
14 RanBP2 Modulates Cox11 and Hexokinase I Activities and Haploinsufficiency of RanBP2 Causes Deficits in Glucose Metabolism Azamat Aslanukov, Reshma Bhowmick, Mallikarjuna R. Guruju et al. · PLoS Genetics Open access 25 Oct 2006 111
15 Laser spot size and scaling laws for laser beam additive manufacturing Jordan S. Weaver, Jarred C. Heigel, Brandon M. Lane · Journal of Manufacturing Processes Open access 9 Nov 2021 104
16 A physically based constitutive model for simulation of segmented chip formation in orthogonal cutting of commercially pure titanium Shreyes N. Melkote, Rui Liu, Patxi Fernandez-Zelaia et al. · CIRP Annals 2015 97
17 Genotyping Single-Nucleotide Polymorphisms by the Invader Assay with Dual-Color Fluorescence Polarization Detection Tony M. Hsu, Scott M. Law, Shenghui Duan et al. · Clinical Chemistry Aug 2001 90
18 Experimental and Theoretical Analysis of the Invasive Signal Amplification Reaction Victor I. Lyamichev, Michael W. Kaiser, Natasha Lyamicheva et al. · Biochemistry 7 Jul 2000 88
19 Impact fracture analysis enhanced by contact of peridynamic and finite element formulations Jooeun Lee, Wenyang Liu, Jung‐Wuk Hong · International Journal of Impact Engineering 24 Jun 2015 84
20 Differentiation of bacterial 16S rRNA genes and intergenic regions and Mycobacterium tuberculosis katG genes by structure-specific endonuclease cleavage Mary Ann D. Brow, Mary C. Oldenburg, Victor I. Lyamichev et al. · Journal of Clinical Microbiology Open access Dec 1996 73
21 An invasive cleavage assay for direct quantitation of specific RNAs Peggy S. Eis, Marilyn C. Olson, Tsetska Takova et al. · Nature Biotechnology Jul 2001 71
22 An enhanced constitutive material model for machining of Ti–6Al–4V alloy Rui Liu, Shreyes N. Melkote, Raghuram V. Pucha et al. · Journal of Materials Processing Technology 3 Jul 2013 69
23 A unified material model including dislocation drag and its application to simulation of orthogonal cutting of OFHC Copper Rui Liu, Meisam Salahshoor, Shreyes N. Melkote et al. · Journal of Materials Processing Technology Open access 5 Oct 2014 68
24 Invader technology for DNA and RNA analysis: principles and applications Monika de Arruda, Victor I. Lyamichev, Peggy S. Eis et al. · Expert Review of Molecular Diagnostics Sep 2002 66
25 IKFlow: Generating Diverse Inverse Kinematics Solutions Barrett Ames, Jeremy Morgan, George Konidaris · IEEE Robotics and Automation Letters 10 Jun 2022 58
26 In Situ Measurements of Melt-Pool Length and Cooling Rate During 3D Builds of the Metal AM-Bench Artifacts Jarred C. Heigel, Brandon M. Lane, Lyle E. Levine · Integrating materials and manufacturing innovation Open access 20 Feb 2020 57
27 Epigenetic Down-Regulation of the Tumor Suppressor Gene PRDM1/Blimp-1 in Diffuse Large B Cell Lymphomas Kui Nie, Taotao Zhang, Hatim T. Allawi et al. · American Journal Of Pathology Open access 22 Jul 2010 56
28 Blueprint for a pop-up SARS-CoV-2 testing lab Alexandra M. Amen et al. · Nature Biotechnology Open access 18 Jun 2020 55
29 Interpretable Intuitive Physics Model Ye Tian, Xiaolong Wang, James Davidson et al. · Lecture notes in computer science Conference paper 2018 54
30 Quantitative analysis of HBV cccDNA from clinical specimens: correlation with clinical and virological response during antiviral therapy Eric J. Bourne, Jules L. Dienstag, Vincent A. Lopez et al. · Journal of Viral Hepatitis 20 Jul 2006 54
31 Determination of hepatitis C virus genotypes in the United States by cleavase fragment length polymorphism analysis David J. Marshall, Laura Heisler, Victor I. Lyamichev et al. · Journal of Clinical Microbiology Open access Dec 1997 53
32 Finite Element Modeling of Carbon Fiber Composite Orthogonal Cutting and Drilling Shuji Usui, Jon Wadell, T. D. Marusich · Procedia CIRP Open access 2014 51
33 Invasive cleavage reactions on DNA‐modified diamond surfaces Manchun Lu, Tanya Knickerbocker, Wei Cai et al. · Biopolymers 17 Feb 2004 50
34 Characterization of Cytochrome P450 2D6 Alleles Using the Invader ™ System Matt J. Neville, Rebecca Selzer, Brian Aizenstein et al. · BioTechniques Open access Jun 2002 49
35 Effects of Friction and Cutting Speed on Cutting Force T. D. Marusich · Manufacturing engineering Conference paper 11 Nov 2001 46
36 Validation of Finite Element Cutting Force Prediction for End Milling Xialin Man, Deyao Ren, Shuji Usui et al. · Procedia CIRP Open access 2012 46
37 Mapping of RNA accessible sites by extension of random oligonucleotide libraries with reverse transcriptase Hatim T. Allawi, Fang Dong, Hon S. Ip et al. · RNA Open access Feb 2001 43
38 Secondary structure prediction and structure-specific sequence analysis of single-stranded DNA Fang Dong · Nucleic Acids Research Open access Aug 2001 42
39 An adaptive finite element method for magnetohydrodynamics S. Lankalapalli, Joseph E. Flaherty, Mark S. Shephard et al. · Journal of Computational Physics 31 Dec 2006 42
40 Modeling of Flap Endonuclease Interactions with DNA Substrate Hatim T. Allawi, Michael W. Kaiser, Alexey V. Onufriev et al. · Journal of Molecular Biology 25 Apr 2003 38
41 Age-dependent Prevalence of Vascular Disease-associated Polymorphisms among 2689 Volunteer Blood Donors Martin J. Hessner, David M. Dinauer, Robert W. Kwiatkowski et al. · Clinical Chemistry Oct 2001 37
42 Evaluation of the Invader Assay, a Linear Signal Amplification Method, for Identification of Mutations Associated with Resistance to Rifampin and Isoniazid in Mycobacterium tuberculosis Robert C. Cooksey, Brian P. Holloway, Mary C. Oldenburg et al. · Antimicrobial Agents and Chemotherapy Open access May 2000 37
43 Hepatitis C: sexual or intrafamilial transmission? Epidemiological and phylogenetic analysis of hepatitis C virus in 24 infected couples Norma de Paula Cavalheiro, Abel De La Rosa, Slava Elagin et al. · Revista da Sociedade Brasileira de Medicina Tropical Open access Jun 2009 37
44 Visual Representations for Semantic Target Driven Navigation Arsalan Mousavian, Alexander Toshev, Marek Fišer et al. Conference paperOpen access May 2019 36
45 A microstructure sensitive grain boundary sliding and slip based constitutive model for machining of Ti-6Al-4V Patxi Fernandez-Zelaia, Shreyes N. Melkote, T. D. Marusich et al. · Mechanics of Materials Open access 30 Mar 2017 35
46 Large-scale SNP scoring from unamplified genomic DNA Lance Fors, Kafryn W. Lieder, Stephanie H Vavra et al. · Pharmacogenomics May 2000 35
47 Predictive Modeling for Tool Deflection and Part Distortion of Large Machined Components S. Jayanti, D. Ren, E. L. Erickson et al. · Procedia CIRP Open access 2013 34
48 NUMERICAL SIMULATIONS OF DUCTILE MACHINING OF SILICON NITRIDE WITH A CUTTING TOOL OF DEFINED GEOMETRY Thimmaiah G. Kumbera, Harish P. Cherukuri, John Patten et al. · Machining Science and Technology 30 Nov 2001 34
49 Comparison Study for Identifying Promoter Allelic Polymorphism in Interleukin 10 and Tumor Necrosis Factor α Genes Poonam Agarwal, Mary C. Oldenburg, Jennifer Czarneski et al. · Diagnostic Molecular Pathology Sep 2000 33
50 RNA Template-dependent 5′ Nuclease Activity ofThermus aquaticus and Thermus thermophilus DNA Polymerases Wu‐Po Ma, Michael W. Kaiser, Natasha Lyamicheva et al. · Journal of Biological Chemistry Open access Aug 2000 33

Citations are OpenAlex's own counts, from its 2026-09-23 snapshot, so the ranking can differ from Google Scholar or Web of Science. A paper is listed for an institution when any of its authors gave it as an affiliation; retracted papers and papers whose citation count cannot be traced to citing works are left out, and a preprint and the article it became are shown once. Release dates are OpenAlex's: where a source gave only a month or a year, that is what is shown. How the lists are chosen.