Most cited papers in Fractal and DNA sequence analysis
What are the most cited papers in Fractal and DNA sequence analysis?
The most cited paper in Fractal and DNA sequence analysis is "A general method applicable to the search for similarities in the amino acid sequence of two proteins" (Saul B. Needleman, Christian D. Wunsch, 1970), with 11,585 citations. Next come "Clustering by Passing Messages Between Data Points" (6,941) and "Mosaic organization of DNA nucleotides" (5,081).
Showing 50 of 99 papers. Every paper with more than 752 citations is listed.
| # | Paper | ||
|---|---|---|---|
| 1 | A general method applicable to the search for similarities in the amino acid sequence of two proteins Saul B. Needleman, Christian D. Wunsch · Journal of Molecular Biology | Mar 1970 | 11,585 |
| 2 | Clustering by Passing Messages Between Data Points Brendan J. Frey, Delbert Dueck · Science | 12 Jan 2007 | 6,941 |
| 3 | Mosaic organization of DNA nucleotides Chung‐Kang Peng, Sergey V. Buldyrev, Shlomo Havlin et al. · Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics | Feb 1994 | 5,081 |
| 4 | FIMO: scanning for occurrences of a given motif Charles E. Grant, Timothy L. Bailey, William Stafford Noble · Bioinformatics | 16 Feb 2011 | 5,063 |
| 5 | Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments Brian J. Haas, Steven L. Salzberg, Wei Zhu et al. · Genome biology | 11 Jan 2008 | 4,564 |
| 6 | Statistical tests of neutrality of mutations. Yun Fu, Wen‐Hsiung Li · Genetics | Mar 1993 | 4,151 |
| 7 | Noiseless coding of correlated information sources David Slepian, Jack K. Wolf · IEEE Transactions on Information Theory | Jul 1973 | 4,035 |
| 8 | Quantification of scaling exponents and crossover phenomena in nonstationary heartbeat time series Chung‐Kang Peng, Shlomo Havlin, Harry Eugene Stanley et al. · Chaos An Interdisciplinary Journal of Nonlinear Science | Mar 1995 | 3,915 |
| 9 | Multifractal detrended fluctuation analysis of nonstationary time series Jan W. Kantelhardt, Stephan A. Zschiegner, Eva Koscielny–Bunde et al. · Physica A Statistical Mechanics and its Applications | Dec 2002 | 3,694 |
| 10 | Fractal measures and their singularities: The characterization of strange sets Thomas C. Halsey, Mogens H. Jensen, Leo P. Kadanoff et al. · Physical Review A | Feb 1986 | 3,310 |
| 11 | EVOLUTIONARY RELATIONSHIP OF DNA SEQUENCES IN FINITE POPULATIONS Fumio Tajima · Genetics | Oct 1983 | 3,243 |
| 12 | CircStat : A MATLAB Toolbox for Circular Statistics Philipp Berens · Journal of Statistical Software | 2009 | 3,146 |
| 13 | Natural Gradient Works Efficiently in Learning Шун-ичи Амари · Neural Computation | Feb 1998 | 2,746 |
| 14 | Multiscale entropy analysis of biological signals Madalena D. Costa, Ary L. Goldberger, Chung‐Kang Peng · Physical Review E | 18 Feb 2005 | 2,525 |
| 15 | Toward a Universal Law of Generalization for Psychological Science Roger N. Shepard · Science | 11 Sep 1987 | 2,512 |
| 16 | A probabilistic atlas and reference system for the human brain: International Consortium for Brain Mapping (ICBM) John C. Mazziotta et al. · Philosophical Transactions of the Royal Society B Biological Sciences | 29 Aug 2001 | 2,442 |
| 17 | Hypervariability of simple sequences as a general source for polymorphic DNA markers Diethard Tautz · Nucleic Acids Research | 25 Aug 1989 | 2,351 |
| 18 | KaKs_Calculator 2.0: A Toolkit Incorporating Gamma-Series Methods and Sliding Window Strategies Dapeng Wang, Yubin Zhang, Zhang Zhang et al. · Genomics Proteomics & Bioinformatics | Mar 2010 | 2,278 |
| 19 | A Tutorial on Principal Component Analysis Jonathon Shlens · arXiv (Cornell University) | 3 Apr 2014 | 2,265 |
| 20 | Fractal dynamics in physiology: Alterations with disease and aging Ary L. Goldberger, Luı́s A. Nunes Amaral, Jeffrey M. Hausdorff et al. · Proceedings of the National Academy of Sciences | 19 Feb 2002 | 2,226 |
| 21 | Assessing the accuracy of prediction algorithms for classification: an overview Pierre Baldi, Søren Brunak, Yves Chauvin et al. · Bioinformatics | May 2000 | 2,167 |
| 22 | Organization, development and function of complex brain networks Olaf Sporns, Dante R. Chialvo, Marcus Kaiser et al. · Trends in Cognitive Sciences | 14 Aug 2004 | 2,117 |
| 23 | The infinite number of generalized dimensions of fractals and strange attractors H. G. E. Hentschel, Itamar Procaccia · Physica D Nonlinear Phenomena | Sep 1983 | 1,814 |
| 24 | BMGE (Block Mapping and Gathering with Entropy): a new software for selection of phylogenetic informative regions from multiple sequence alignments Alexis Criscuolo, Simonetta Gribaldo · BMC Evolutionary Biology | 2010 | 1,799 |
| 25 | The Google Similarity Distance Rudi Cilibrasi, Paul M. B. Vitanyi · IEEE Transactions on Knowledge and Data Engineering | 9 Feb 2007 | 1,772 |
| 26 | Natural speech reveals the semantic maps that tile human cerebral cortex Alexander G. Huth, Wendy A. de Heer, Thomas L. Griffiths et al. · Nature | Apr 2016 | 1,673 |
| 27 | Improved Splice Site Detection in Genie Martin G. Reese, Frank H. Eeckman, David Kulp et al. · Journal of Computational Biology | 1997 | 1,605 |
| 28 | Deep Learning Enabled Semantic Communication Systems Huiqiang Xie, Zhijin Qin, Geoffrey Ye Li et al. · IEEE Transactions on Signal Processing | 2021 | 1,573 |
| 29 | Consciousness as Integrated Information: a Provisional Manifesto Giulio Tononi · Biological Bulletin | Dec 2008 | 1,556 |
| 30 | Self-organization in a perceptual network Ralph Linsker · Computer | Mar 1988 | 1,532 |
| 31 | Detrended Cross-Correlation Analysis: A New Method for Analyzing Two Nonstationary Time Series Boris Podobnik, Harry Eugene Stanley · Physical Review Letters | 27 Feb 2008 | 1,504 |
| 32 | Long-range correlations in nucleotide sequences Chung‐Kang Peng, Sergey V. Buldyrev, Ary L. Goldberger et al. · Nature | Mar 1992 | 1,440 |
| 33 | Nonlinear dynamical analysis of EEG and MEG: Review of an emerging field Cornelis J. Stam · Clinical Neurophysiology | 23 Aug 2005 | 1,440 |
| 34 | Detecting long-range correlations with detrended fluctuation analysis Jan W. Kantelhardt, Eva Koscielny–Bunde, Hênio Henrique Aragao Rêgo et al. · Physica A Statistical Mechanics and its Applications | Jun 2001 | 1,424 |
| 35 | Survey of automatic modulation classification techniques: classical approaches and new trends Octavia A. Dobre, Ali A. Abdi, Yeheskel Bar-Ness et al. · IET Communications | Apr 2007 | 1,409 |
| 36 | DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome Yanrong Ji, Zhihan Zhou, Han Liu et al. · Bioinformatics | 3 Feb 2021 | 1,351 |
| 37 | NICE: Non-linear Independent Components Estimation Laurent Dinh, David W. Krueger, Yoshua Bengio · arXiv (Cornell University) | 30 Oct 2014 | 1,349 |
| 38 | Connectionist Models and Their Properties Jerome A. Feldman, D.H. Ballard · Cognitive Science | Jul 1982 | 1,326 |
| 39 | Exploiting Generative Models in Discriminative Classifiers Tommi Jaakkola, David H. Haussler | Dec 1998 | 1,283 |
| 40 | Understanding the Lomb–Scargle Periodogram Jake Vanderplas · The Astrophysical Journal Supplement Series | May 2018 | 1,279 |
| 41 | Identifying DNA and protein patterns with statistically significant alignments of multiple sequences. Gerald Z. Hertz, Gary D. Stormo · Bioinformatics | Jul 1999 | 1,275 |
| 42 | Image coding based on a fractal theory of iterated contractive image transformations Arnaud E. Jacquin · IEEE Transactions on Image Processing | 1992 | 1,274 |
| 43 | The staden sequence analysis package Rodger Staden · Molecular Biotechnology | Jun 1996 | 1,271 |
| 44 | Clustering by Compression Rudi Cilibrasi, Paul M. B. Vitanyi · IEEE Transactions on Information Theory | Apr 2005 | 1,199 |
| 45 | The Evolution of Communication Sam Gliksman · Corwin eBooks | 2016 | 1,175 |
| 46 | ggseqlogo: a versatile R package for drawing sequence logos Omar Wagih · Bioinformatics | 18 Jul 2017 | 1,108 |
| 47 | Hierarchical digital modulation classification using cumulants Ananthram Swami, Brian M. Sadler · IEEE Transactions on Communications | Mar 2000 | 1,102 |
| 48 | The gamma cycle Pascal Henry Fries, Danko Nikolić, Wolf Singer · Trends in Neurosciences | 7 Jun 2007 | 1,082 |
| 49 | The Similarity Metric Ming Li, Daniel Chen, Xuefeng Li et al. · IEEE Transactions on Information Theory | 30 Nov 2004 | 1,080 |
| 50 | Blind identification and equalization based on second-order statistics: a time domain approach Lang Tong, Guanghan Xu, T. Kailath · IEEE Transactions on Information Theory | Mar 1994 | 1,078 |
Citations are OpenAlex's own counts, from its 2026-09-23 snapshot, so the ranking can differ from Google Scholar or Web of Science. A paper is listed for a field when OpenAlex files it under one of the field's topics; retracted papers and papers whose citation count cannot be traced to citing works are left out, and a preprint and the article it became are shown once. Release dates are OpenAlex's: where a source gave only a month or a year, that is what is shown. How the lists are chosen.