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Most cited papers in Plant Molecular Biology Research

What are the most cited papers in Plant Molecular Biology Research?

The most cited paper in Plant Molecular Biology Research is "MicroRNAs" (David P. Bartel, 2004), with 35,138 citations. Next come "Floral dip: a simplified method for Agrobacterium ‐mediated transformation of Arabidopsis thaliana" (22,756) and "Mechanisms of Salinity Tolerance" (13,850).

Showing 50 of 100 papers. Every paper with more than 1,896 citations is listed.

Most cited papers, sortable by citations and release date
#Paper
1 MicroRNAs David P. Bartel · Cell Open access 2004 35,138
2 Floral dip: a simplified method for Agrobacterium ‐mediated transformation of Arabidopsis thaliana Steven John Clough, Andrew F. Bent · The Plant Journal Open access Dec 1998 22,756
3 Mechanisms of Salinity Tolerance Rana Munns, Mark A. Tester · Annual Review of Plant Biology Review 7 Feb 2008 13,850
4 Conserved Seed Pairing, Often Flanked by Adenosines, Indicates that Thousands of Human Genes are MicroRNA Targets Benjamin P. Lewis, Christopher B. Burge, David P. Bartel · Cell Open access 2005 12,048
5 PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences Magali Lescot · Nucleic Acids Research Open access 2002 8,702
6 S ALT AND D ROUGHT S TRESS S IGNAL T RANSDUCTION IN P LANTS Jian‐Kang Zhu · Annual Review of Plant Biology ReviewOpen access Jun 2002 5,930
7 Signals from chloroplasts converge to regulate nuclear gene expression. Shai Koussevitzky, Ajit Nott, Todd C. Mockler et al. · PubMed Open access 4 May 2007 5,685
8 Arabidopsis mesophyll protoplasts: a versatile cell system for transient gene expression analysis Sang-Dong Yoo, Young-Hee Cho, Jen Sheen · Nature Protocols 21 Jun 2007 5,307
9 MYB transcription factors in Arabidopsis Christian Dubos, Ralf Stracke, Erich Grotewold et al. · Trends in Plant Science Review 31 Jul 2010 5,164
10 Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs Lee P. Lim, Nelson C. Lau, Philip W. Garrett-Engele et al. · Nature 30 Jan 2005 4,816
11 Assaying chimeric genes in plants: The GUS gene fusion system Richard Jefferson · Plant Molecular Biology Reporter Dec 1987 4,508
12 The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray) Gerald A. Tuskan et al. · Science Open access110 authors 15 Sep 2006 4,498
13 Establishing, maintaining and modifying DNA methylation patterns in plants and animals Julie A. Law, Steven E. Jacobsen · Nature Reviews Genetics ReviewOpen access 9 Feb 2010 4,070
14 Capturing Chromosome Conformation Job Dekker, Karsten Rippe, Martijn Dekker et al. · Science 15 Feb 2002 3,876
15 PLANT COLD ACCLIMATION: Freezing Tolerance Genes and Regulatory Mechanisms Michael F. Thomashow · Annual Review of Plant Physiology and Plant Molecular Biology Jun 1999 3,648
16 Plant salt tolerance Jian‐Kang Zhu · Trends in Plant Science Review Feb 2001 3,547
17 Plant cis-acting regulatory DNA elements (PLACE) database: 1999 Kenichi Higo, Yoshihiro Ugawa, Masao Iwamoto et al. · Nucleic Acids Research Open access 1999 3,474
18 Growth of the plant cell wall Daniel J. Cosgrove · Nature Reviews Molecular Cell Biology Review Nov 2005 3,348
19 Na+ Tolerance and Na+ Transport in Higher Plants Mark A. Tester · Annals of Botany Open access 6 Feb 2003 3,276
20 Abscisic Acid: Emergence of a Core Signaling Network Sean R. Cutler, Pedro L. Rodrı́guez, Ruth R. Finkelstein et al. · Annual Review of Plant Biology ReviewOpen access 4 May 2010 3,246
21 The WRKY superfamily of plant transcription factors Thomas Eulgem, Paul J. Rushton, Silke Robatzek et al. · Trends in Plant Science Review May 2000 3,159
22 DNA methylation landscapes: provocative insights from epigenomics Miho M. Suzuki, Adrian Peter Bird · Nature Reviews Genetics Review 8 May 2008 3,127
23 The war of the whorls: genetic interactions controlling flower development Enrico Coen, Elliot M. Meyerowitz · Nature Sep 1991 3,113
24 Genes and salt tolerance: bringing them together Rana Munns · New Phytologist Jul 2005 3,094
25 Two Transcription Factors, DREB1 and DREB2, with an EREBP/AP2 DNA Binding Domain Separate Two Cellular Signal Transduction Pathways in Drought- and Low-Temperature-Responsive Gene Expression, Respectively, in Arabidopsis Qiang Liu, Mie Kasuga, Yoh Sakuma et al. · The Plant Cell Open access Aug 1998 3,093
26 Abscisic Acid Inhibits Type 2C Protein Phosphatases via the PYR/PYL Family of START Proteins Sang‐Youl Park et al. · Science Open access 30 Apr 2009 3,078
27 TRANSCRIPTIONAL REGULATORY NETWORKS IN CELLULAR RESPONSES AND TOLERANCE TO DEHYDRATION AND COLD STRESSES Kazuko Yamaguchi‐Shinozaki, Kazuo Shinozaki · Annual Review of Plant Biology Review 7 Apr 2006 3,044
28 Arabidopsis Transcription Factors: Genome-Wide Comparative Analysis Among Eukaryotes José Luis Riechmann, Jacqueline E. Heard, Greg S. Martin et al. · Science 15 Dec 2000 2,887
29 WRKY transcription factors Paul J. Rushton, Imre E. Somssich, Patricia Ringler et al. · Trends in Plant Science 23 Mar 2010 2,837
30 MEME: discovering and analyzing DNA and protein sequence motifs Timothy L. Bailey, N. Williams, C. Misleh et al. · Nucleic Acids Research Open access Jul 2006 2,804
31 MicroRNAs AND THEIR REGULATORY ROLES IN PLANTS Matthew W. Jones-Rhoades, David P. Bartel, Bonnie Bartel · Annual Review of Plant Biology Review 31 Jan 2006 2,768
32 The Microprocessor complex mediates the genesis of microRNAs Richard I. Gregory, Kai-ping Yan, Govindasamy Amuthan et al. · Nature Nov 2004 2,758
33 A Gateway Cloning Vector Set for High-Throughput Functional Analysis of Genes in Planta Mark D. Curtis, Ueli Grossniklaus · PLANT PHYSIOLOGY Open access Oct 2003 2,732
34 Local, Efflux-Dependent Auxin Gradients as a Common Module for Plant Organ Formation Eva Benková, Marta Michniewicz, Michael Sauer et al. · Cell Open access Nov 2003 2,695
35 Role of plant hormones in plant defence responses Rajendra P. Bari, Jonathan D. G. Jones · Plant Molecular Biology 15 Dec 2008 2,681
36 Chromatin Structure: A Repeating Unit of Histones and DNA Roger D. Kornberg · Science 24 May 1974 2,679
37 An “Electronic Fluorescent Pictograph” Browser for Exploring and Analyzing Large-Scale Biological Data Sets Debbie Winter, Ben Vinegar, Hardeep K. Nahal-Bose et al. · PLoS ONE Open access 7 Aug 2007 2,656
38 Drought and Salt Tolerance in Plants Dorothea Bartels, Ramanjulu Sunkar · Critical Reviews in Plant Sciences 23 Feb 2005 2,647
39 The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana Steven B. Cannon, Arvind Mitra, Andrew M. Baumgarten et al. · BMC Plant Biology Open access Jun 2004 2,635
40 A gene expression map of Arabidopsis thaliana development Markus M. Schmid, Timothy S. Davison, Stefan R. Henz et al. · Nature Genetics 3 Apr 2005 2,583
41 PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants Jinpu Jin, Feng Tian, De-Chang Yang et al. · Nucleic Acids Research Open access 12 Oct 2016 2,577
42 RNA silencing in plants David C. Baulcombe · Nature 15 Sep 2004 2,559
43 Regulators of PP2C Phosphatase Activity Function as Abscisic Acid Sensors Yue Ma, Izabela Szostkiewicz, Arthur Korte et al. · Science 30 Apr 2009 2,526
44 Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis Ryan Lister, Ronan C. O’Malley, Julian Tonti‐Filippini et al. · Cell Open access 18 Apr 2008 2,521
45 The physiology of plant responses to drought Aditi Gupta, Andrés Rico‐Medina, Ana I. Caño‐Delgado · Science Open access 16 Apr 2020 2,487
46 Agrobacterium-mediated transformation of Arabidopsis thaliana using the floral dip method Xiuren Zhang, Rossana Henriques, Shih‐Shun Lin et al. · Nature Protocols 29 Jun 2006 2,468
47 The role of stomata in sensing and driving environmental change Alistair M. Hetherington, F. I. Woodward · Nature Aug 2003 2,459
48 Genome-Wide Analysis of the ERF Gene Family in Arabidopsis and Rice Toshitsugu Nakano, Kaoru Suzuki, Tatsuhito Fujimura et al. · PLANT PHYSIOLOGY Open access 11 Jan 2006 2,412
49 Arabidopsis AtMYC2 (bHLH) and AtMYB2 (MYB) Function as Transcriptional Activators in Abscisic Acid Signaling Hiroshi Abe, Takeshi Urao, Takuya Ito et al. · The Plant Cell Open access 19 Dec 2002 2,396
50 Calcium in Plants Philip John White · Annals of Botany Open access 24 Sep 2003 2,384

Citations are OpenAlex's own counts, from its 2026-09-23 snapshot, so the ranking can differ from Google Scholar or Web of Science. A paper is listed for a field when OpenAlex files it under one of the field's topics; retracted papers and papers whose citation count cannot be traced to citing works are left out, and a preprint and the article it became are shown once. Release dates are OpenAlex's: where a source gave only a month or a year, that is what is shown. How the lists are chosen.