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Most cited papers from ITMO University

What are the most cited papers from ITMO University?

The most cited paper from ITMO University is "Fast gene set enrichment analysis" (Gennady Korotkevich, Vladimir Sukhov, Nikolay Budin et al., 2016), with 3,771 citations. Next come "Towards complete and error-free genome assemblies of all vertebrate species" (3,311) and "Asymmetric Metasurfaces with High- Q Resonances Governed by Bound States in the Continuum" (2,113).

Showing 50 of 60 papers. Every paper with more than 428 citations is listed.

Most cited papers, sortable by citations and release date
#Paper
1 Fast gene set enrichment analysis Gennady Korotkevich, Vladimir Sukhov, Nikolay Budin et al. · bioRxiv (Cold Spring Harbor Laboratory) PreprintOpen access 20 Jun 2016 3,771
2 Towards complete and error-free genome assemblies of all vertebrate species Arang Rhie et al. · Nature Open access129 authors 28 Apr 2021 3,311
3 Asymmetric Metasurfaces with High- Q Resonances Governed by Bound States in the Continuum Kirill Koshelev, Sergey Lepeshov, Mingkai Liu et al. · Physical Review Letters Open access 9 Nov 2018 2,113
4 Hyperbolic metamaterials Alexander N. Poddubny, Ivan V. Iorsh, Pavel A. Belov et al. · Nature Photonics 28 Nov 2013 2,108
5 Network Integration of Parallel Metabolic and Transcriptional Data Reveals Metabolic Modules that Regulate Macrophage Polarization Abhishek Jha, Stanley Ching‐Cheng Huang, Alexey Sergushichev et al. · Immunity Open access Mar 2015 2,076
6 Fano resonances in photonics M. F. Limonov, Mikhail V. Rybin, Alexander N. Poddubny et al. · Nature Photonics Sep 2017 2,005
7 Large-scale association analyses identify host factors influencing human gut microbiome composition Alexander Kurilshikov et al. · Nature Genetics Open access104 authors 18 Jan 2021 1,903
8 Itaconate Links Inhibition of Succinate Dehydrogenase with Macrophage Metabolic Remodeling and Regulation of Inflammation Vicky Lampropoulou, Alexey Sergushichev, Monika Bambousková et al. · Cell Metabolism Open access Jul 2016 1,572
9 Metasurfaces: From microwaves to visible Stanislav Glybovski, Sergei Tretyakov, Pavel A. Belov et al. · Physics Reports May 2016 1,403
10 TREM2 Maintains Microglial Metabolic Fitness in Alzheimer’s Disease Tyler Kent Ulland, Wilbur M. Song, Stanley Ching‐Cheng Huang et al. · Cell Open access Aug 2017 1,316
11 Distinct patterns of somatic genome alterations in lung adenocarcinomas and squamous cell carcinomas Joshua David Campbell et al. · Nature Genetics Open access 9 May 2016 1,261
12 Human and mouse single-nucleus transcriptomics reveal TREM2-dependent and TREM2-independent cellular responses in Alzheimer’s disease Yingyue Zhou et al. · Nature Medicine Open access 2020 1,249
13 On-chip generation of high-dimensional entangled quantum states and their coherent control Michael Kues, Christian Reimer, Piotr Roztocki et al. · Nature Open access Jun 2017 1,209
14 Micro-combs: A novel generation of optical sources Alessia Pasquazi, Marco Peccianti, Luca Razzari et al. · Physics Reports Open access 12 Oct 2017 1,093
15 Haplotype-resolved assembly of diploid genomes without parental data Haoyu Cheng, Erich D. Jarvis, Olivier D. Fedrigo et al. · Nature Biotechnology Open access 24 Mar 2022 1,082
16 Subwavelength dielectric resonators for nonlinear nanophotonics Kirill Koshelev, Sergey Kruk, Elizaveta Melik-Gaykazyan et al. · Science Open access 16 Jan 2020 1,018
17 Artificial Intelligence trends in education: a narrative overview Maud Chassignol, А В Хорошавин, Alexandra Klímová et al. · Procedia Computer Science Conference paperOpen access 2018 940
18 Ripple effect in the supply chain: an analysis and recent literature Alexandre B. Dolgui, Dmitry Ivanov, Boris Sokolov · International Journal of Production Research 18 Oct 2017 897
19 Burden of 375 diseases and injuries, risk-attributable burden of 88 risk factors, and healthy life expectancy in 204 countries and territories, including 660 subnational locations, 1990–2023: a systematic analysis for the Global Burden of Disease Study 2023 Simon I Hay et al. · The Lancet Open access2,780 authors Oct 2025 762
20 Electrophilic properties of itaconate and derivatives regulate the IκBζ–ATF3 inflammatory axis Monika Bambousková et al. · Nature Open access Apr 2018 748
21 Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species Keith Bradnam et al. · GigaScience Open access 22 Jul 2013 739
22 Topological semimetals A. A. Burkov · Nature Materials Open access 25 Oct 2016 729
23 Comprehensive Profiling of an Aging Immune System Reveals Clonal GZMK+ CD8+ T Cells as Conserved Hallmark of Inflammaging Denis A. Mogilenko, Oleg Shpynov, Prabhakar Sairam Andhey et al. · Immunity Open access 2 Dec 2020 724
24 High- Q Supercavity Modes in Subwavelength Dielectric Resonators Mikhail V. Rybin, Kirill Koshelev, Zarina F. Sadrieva et al. · Physical Review Letters Open access 13 Dec 2017 717
25 Catalytic (de)hydrogenation promoted by non-precious metals – Co, Fe and Mn: recent advances in an emerging field Georgy A. Filonenko, Robbert van Putten, Emiel J. M. Hensen et al. · Chemical Society Reviews ReviewOpen access 2018 715
26 Quantum optical microcombs Michael Kues, Christian Reimer, Joseph M. Lukens et al. · Nature Photonics Open access 21 Feb 2019 713
27 Functional Meta-Optics and Nanophotonics Governed by Mie Resonances Sergey Kruk, Yuri S. Kivshar · ACS Photonics 18 Oct 2017 640
28 Osteoblast Differentiation at a Glance Arkady Rutkovskiy, Kåre‐Olav Stensløkken, Ingvar Jarle Vaage · Medical science monitor basic research/Medical science monitor. Basic research Open access 26 Sep 2016 638
29 TLR4 Signaling Pathway Modulators as Potential Therapeutics in Inflammation and Sepsis Nikolay N. Kuzmich, К. В. Сивак, Vladimir N. Chubarev et al. · Vaccines Open access 4 Oct 2017 634
30 RF Photonics: An Optical Microcombs’ Perspective Jiayang Wu, Xingyuan Xu, Thach Giang Nguyen et al. · IEEE Journal of Selected Topics in Quantum Electronics Open access 15 Feb 2018 629
31 High-dimensional one-way quantum processing implemented on d-level cluster states Christian Reimer, Stefania Sciara, Piotr Roztocki et al. · Nature Physics Open access 19 Nov 2018 618
32 Meta-optics and bound states in the continuum Kirill Koshelev, Andrey Bogdanov, Yuri S. Kivshar · 中国科学通报:英文版 Open access 7 Dec 2018 583
33 A tutorial on modeling and analysis of dynamic social networks. Part I Anton V. Proskurnikov, Roberto Tempo · Annual Reviews in Control Open access 2017 578
34 Nonlinear Metasurfaces Governed by Bound States in the Continuum Kirill Koshelev, Yutao Tang, Kingfai Li et al. · ACS Photonics Open access 25 Jun 2019 570
35 A dynamic model and an algorithm for short-term supply chain scheduling in the smart factory industry 4.0 Dmitry Ivanov, Alexandre B. Dolgui, Boris Sokolov et al. · International Journal of Production Research Open access 19 Jan 2015 564
36 Advanced RF and microwave functions based on an integrated optical frequency comb source Xingyuan Xu, Jiayang Wu, Thach Giang Nguyen et al. · Optics Express Open access 24 Jan 2018 562
37 All-dielectric optical nanoantennas Alexander E. Krasnok, Andrey E. Miroshnichenko, Pavel A. Belov et al. · Optics Express Open access 23 Aug 2012 559
38 Hyaluronic Acid: The Influence of Molecular Weight on Structural, Physical, Physico-Chemical, and Degradable Properties of Biopolymer Petr Snetkov, Kseniia Zakharova, Svetlana N. Morozkina et al. · Polymers Open access 11 Aug 2020 545
39 Photonic quadrupole topological phases Sunil Mittal, Venkata Vikram Orre, Guanyu Zhu et al. · Nature Photonics Open access 17 Jun 2019 539
40 Passively mode-locked laser with an ultra-narrow spectral width Michael Kues, Christian Reimer, Benjamin Wetzel et al. · Nature Photonics Open access 23 Jan 2017 502
41 Reconfigurable broadband microwave photonic intensity differentiator based on an integrated optical frequency comb source Xingyuan Xu, Jiayang Wu, Mehrdad Shoeiby et al. · APL Photonics Open access Sep 2017 501
42 Global burden of 292 causes of death in 204 countries and territories and 660 subnational locations, 1990–2023: a systematic analysis for the Global Burden of Disease Study 2023 Mohsen Naghavi et al. · The Lancet Open access2,463 authors Oct 2025 500
43 Advanced Adaptive Photonic RF Filters with 80 Taps Based on an Integrated Optical Micro-Comb Source Xingyuan Xu, Mengxi Tan, Jiayang Wu et al. · Journal of Lightwave Technology Open access 23 Jan 2019 494
44 Efferocytosis Fuels Requirements of Fatty Acid Oxidation and the Electron Transport Chain to Polarize Macrophages for Tissue Repair Shuang Zhang, Samuel Edward Weinberg, Matthew DeBerge et al. · Cell Metabolism Open access 27 Dec 2018 490
45 Nonradiating photonics with resonant dielectric nanostructures Kirill Koshelev, Gael Favraud, Andrey Bogdanov et al. · Nanophotonics Open access Jun 2018 488
46 High performance RF filters via bandwidth scaling with Kerr micro-combs Xingyuan Xu, Mengxi Tan, Jiayang Wu et al. · APL Photonics Open access Feb 2019 485
47 Links of gut microbiota composition with alcohol dependence syndrome and alcoholic liver disease Veronika B. Dubinkina et al. · Microbiome Open access 17 Oct 2017 484
48 Ultralow-threshold laser using super-bound states in the continuum Min‐Soo Hwang, Hoo-Cheol Lee, Kyoung‐Ho Kim et al. · Nature Communications Open access 5 Jul 2021 473
49 Microcomb-Based Photonic RF Signal Processing Xingyuan Xu, Mengxi Tan, Jiayang Wu et al. · IEEE Photonics Technology Letters Open access 11 Sep 2019 466
50 All-dielectric nanophotonics: the quest for better materials and fabrication techniques Denis G. Baranov, Dmitry A. Zuev, Sergey Lepeshov et al. · Optica Open access 13 Jul 2017 462

Citations are OpenAlex's own counts, from its 2026-09-23 snapshot, so the ranking can differ from Google Scholar or Web of Science. A paper is listed for an institution when any of its authors gave it as an affiliation; retracted papers and papers whose citation count cannot be traced to citing works are left out, and a preprint and the article it became are shown once. Release dates are OpenAlex's: where a source gave only a month or a year, that is what is shown. How the lists are chosen.