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Most cited papers from Kyoto University

What are the most cited papers from Kyoto University?

The most cited paper from Kyoto University is "KEGG: Kyoto Encyclopedia of Genes and Genomes" (Minoru I. Kanehisa, 2000), with 40,289 citations. Next come "KEGG: Kyoto Encyclopedia of Genes and Genomes" (32,529) and "Induction of Pluripotent Stem Cells from Mouse Embryonic and Adult Fibroblast Cultures by Defined Factors" (26,957).

Showing 50 of 60 papers. Every paper with more than 3,090 citations is listed.

Most cited papers, sortable by citations and release date
#Paper
1 KEGG: Kyoto Encyclopedia of Genes and Genomes Minoru I. Kanehisa · Nucleic Acids Research Open access 2000 40,289
2 KEGG: Kyoto Encyclopedia of Genes and Genomes Hiroyuki Ogata, Susumu Goto, Kazushige Sato et al. · Nucleic Acids Research Open access 1999 32,529
3 Induction of Pluripotent Stem Cells from Mouse Embryonic and Adult Fibroblast Cultures by Defined Factors Kazutoshi Takahashi, Shinya Yamanaka · Cell Open access Aug 2006 26,957
4 Induction of Pluripotent Stem Cells from Adult Human Fibroblasts by Defined Factors Kazutoshi Takahashi, Koji Tanabe, Mari Ohnuki et al. · Cell Nov 2007 20,424
5 MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform Kazutaka Katoh · Nucleic Acids Research Open access 15 Jul 2002 18,198
6 First principles phonon calculations in materials science Atsushi Togo, Isao Tanaka · Scripta Materialia Open access 29 Jul 2015 11,731
7 Functional Porous Coordination Polymers Susumu Kitagawa, Ryo Kitaura, Shin‐ichiro Noro · Angewandte Chemie International Edition 22 Apr 2004 11,069
8 Observation of a new particle in the search for the Standard Model Higgs boson with the ATLAS detector at the LHC G. Aad et al. · Physics Letters B Open access2,932 authors 14 Aug 2012 10,856
9 Hydrogen Peroxide is Scavenged by Ascorbate-specific Peroxidase in Spinach Chloroplasts Yoshiyuki Nakano, Kozi Asada · Plant and Cell Physiology Aug 1981 10,779
10 KEGG: new perspectives on genomes, pathways, diseases and drugs Minoru I. Kanehisa, Miho Furumichi, Mao Tanabe et al. · Nucleic Acids Research Open access 26 Oct 2016 9,650
11 Control of Regulatory T Cell Development by the Transcription Factor Foxp3 Shohei Hori, Takashi Nomura, Shimon Sakaguchi · Science 13 Feb 2003 8,213
12 KEGG as a reference resource for gene and protein annotation Minoru I. Kanehisa, Yoko Sato, Masayuki Kawashima et al. · Nucleic Acids Research Open access 17 Oct 2015 8,051
13 Review of Particle Physics Masaharu Tanabashi et al. · Physical review. D/Physical review. D. Open access232 authors 17 Aug 2018 7,268
14 KEGG for linking genomes to life and the environment Minoru I. Kanehisa, Michihiro Araki, Susumu Goto et al. · Nucleic Acids Research Open access 12 Dec 2007 7,126
15 KEGG for taxonomy-based analysis of pathways and genomes Minoru I. Kanehisa, Miho Furumichi, Yoko Sato et al. · Nucleic Acids Research Open access 13 Oct 2022 6,767
16 Toward understanding the origin and evolution of cellular organisms Minoru I. Kanehisa · Protein Science Open access 23 Aug 2019 6,691
17 CP-Violation in the Renormalizable Theory of Weak Interaction M. Kobayashi, Toshihide Maskawa · Progress of Theoretical Physics Open access Feb 1973 6,651
18 Research Development on Sodium-Ion Batteries Naoaki Yabuuchi, Kei Kubota, Mouad Dahbi et al. · Chemical Reviews Review 12 Nov 2014 6,484
19 Dapagliflozin and Cardiovascular Outcomes in Type 2 Diabetes Stephen D. Wiviott, Itamar Raz, Marc P. Bonaca et al. · New England Journal of Medicine Open access 10 Nov 2018 6,466
20 Global, Regional, and National Cancer Incidence, Mortality, Years of Life Lost, Years Lived With Disability, and Disability-Adjusted Life-years for 32 Cancer Groups, 1990 to 2015 Christina Fitzmaurice et al. · JAMA Oncology Open access185 authors 5 Dec 2016 6,333
21 The International HapMap Project Richard A. Gibbs et al. · Nature Open access183 authors 18 Dec 2003 6,187
22 Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition) Daniel J. Klionsky et al. · Autophagy Open access2,467 authors 2 Jan 2016 6,023
23 Tisagenlecleucel in Children and Young Adults with B-Cell Lymphoblastic Leukemia Shannon L. Maude et al. · New England Journal of Medicine Open access 31 Jan 2018 5,818
24 First-principles calculations of the ferroelastic transition between rutile-type and CaCl 2 -type SiO 2 at high pressures Atsushi Togo, Fumiyasu Oba, Isao Tanaka · Physical Review B Open access 14 Oct 2008 5,518
25 Regulatory T Cells and Immune Tolerance Shimon Sakaguchi, Tomoyuki Yamaguchi, Takashi Nomura et al. · Cell Open access May 2008 5,393
26 Engagement of the Pd-1 Immunoinhibitory Receptor by a Novel B7 Family Member Leads to Negative Regulation of Lymphocyte Activation Gordon J. Freeman, Andrew J. Long, Yoshiko Iwai et al. · The Journal of Experimental Medicine Open access 2 Oct 2000 5,324
27 The KEGG resource for deciphering the genome Minoru Kanehisa · Nucleic Acids Research Open access 17 Dec 2003 5,322
28 KEGG for integration and interpretation of large-scale molecular data sets Minoru I. Kanehisa, Susumu Goto, Yoko Sato et al. · Nucleic Acids Research Open access 10 Nov 2011 5,051
29 MAFFT version 5: improvement in accuracy of multiple sequence alignment Kazutaka Katoh · Nucleic Acids Research Open access 19 Jan 2005 5,033
30 KEGG: integrating viruses and cellular organisms Minoru I. Kanehisa, Miho Furumichi, Yoko Sato et al. · Nucleic Acids Research Open access 9 Oct 2020 4,784
31 Convolutional neural networks: an overview and application in radiology Rikiya Yamashita, Mizuho Nishio, Richard Kinh Gian et al. · Insights into Imaging Open access 22 Jun 2018 4,717
32 Transport, Collective Motion, and Brownian Motion Hazime Mori · Progress of Theoretical Physics Mar 1965 4,628
33 A second generation human haplotype map of over 3.1 million SNPs Sarah Shaw Murray et al. · Nature Open access211 authors Oct 2007 4,615
34 BlastKOALA and GhostKOALA: KEGG Tools for Functional Characterization of Genome and Metagenome Sequences Minoru I. Kanehisa, Yoko Sato, Kanae Morishima · Journal of Molecular Biology Open access 14 Nov 2015 4,447
35 KAAS: an automatic genome annotation and pathway reconstruction server Yuki Moriya, Masumi Itoh, Shujiro Okuda et al. · Nucleic Acids Research Open access 8 May 2007 4,385
36 The 2016 update of the International Study Group (ISGPS) definition and grading of postoperative pancreatic fistula: 11 Years After Claudio Bassi et al. · Surgery Open access 28 Dec 2016 4,323
37 Generation of germline-competent induced pluripotent stem cells Keisuke Okita, Tomoko Ichisaka, Shinya Yamanaka · Nature 6 Jun 2007 4,268
38 Sarcopenia in Asia: Consensus Report of the Asian Working Group for Sarcopenia Liang‐Kung Chen et al. · Journal of the American Medical Directors Association 24 Jan 2014 4,202
39 XBP1 mRNA Is Induced by ATF6 and Spliced by IRE1 in Response to ER Stress to Produce a Highly Active Transcription Factor Hiderou Yoshida, Toshie Matsui, Akira Yamamoto et al. · Cell Open access Dec 2001 4,139
40 Metal–Organic Frameworks (MOFs) Hong-Cai “Joe” Zhou, Susumu Kitagawa · Chemical Society Reviews 10 Jul 2014 4,135
41 Options, Futures and Other Derivatives Takeaki Kariya, Regina Y. Liu Book chapter 2003 3,987
42 Barygenesis without grand unification M. Fukugita, T. Yanagida · Physics Letters B Jun 1986 3,935
43 Differential roles of MDA5 and RIG-I helicases in the recognition of RNA viruses Hiroki Kato, Osamu Takeuchi, Shintaro Sato et al. · Nature 9 Apr 2006 3,913
44 Global, Regional, and National Burden of Cardiovascular Diseases for 10 Causes, 1990 to 2015 Gregory A. Roth et al. · Journal of the American College of Cardiology Open access171 authors 17 May 2017 3,906
45 Solutions able to reproduce in vivo surface‐structure changes in bioactive glass‐ceramic A‐W 3 T Kokubo, H. Kushitani, S. Sakka et al. · Journal of Biomedical Materials Research Jun 1990 3,844
46 Generation of large numbers of dendritic cells from mouse bone marrow cultures supplemented with granulocyte/macrophage colony-stimulating factor. Kensuke Inaba, Muneo Inaba, Nikolaus Romani et al. · The Journal of Experimental Medicine Open access Dec 1992 3,789
47 Personalizing the treatment of women with early breast cancer: highlights of the St Gallen International Expert Consensus on the Primary Therapy of Early Breast Cancer 2013 Aron Goldhirsch et al. · Annals of Oncology Open access 6 Aug 2013 3,776
48 Genistein, a specific inhibitor of tyrosine-specific protein kinases. Tetsu Akiyama, Junko Ishida, Shizue Nakagawa et al. · Journal of Biological Chemistry Open access Apr 1987 3,750
49 Comparative Efficacy and Acceptability of 21 Antidepressant Drugs for the Acute Treatment of Adults With Major Depressive Disorder: A Systematic Review and Network Meta-Analysis Andrea Cipriani, Toshi A. Furukawa, Georgia Salanti et al. · The Lancet ReviewOpen access 21 Feb 2018 3,587
50 Class Switch Recombination and Hypermutation Require Activation-Induced Cytidine Deaminase (AID), a Potential RNA Editing Enzyme Masamichi Muramatsu, Kazuo Kinoshita, Sidonia Fagarasan et al. · Cell Open access Sep 2000 3,503

Citations are OpenAlex's own counts, from its 2026-09-23 snapshot, so the ranking can differ from Google Scholar or Web of Science. A paper is listed for an institution when any of its authors gave it as an affiliation; retracted papers and papers whose citation count cannot be traced to citing works are left out, and a preprint and the article it became are shown once. Release dates are OpenAlex's: where a source gave only a month or a year, that is what is shown. How the lists are chosen.