Most cited papers from Stem Cell Institute

Stem Cell Institute

What are the most cited papers from Stem Cell Institute?

The most cited paper from Stem Cell Institute is "SOAPnuke: a MapReduce acceleration-supported software for integrated quality control and preprocessing of high-throughput sequencing data" (Yuxin Chen, Yongsheng Chen, Chunmei Shi et al., 2017), with 2,666 citations. Next come "Association of reactive oxygen species levels and radioresistance in cancer stem cells" (2,565) and "Mesenchymal stem cell perspective: cell biology to clinical progress" (2,083).

Published TypeFieldAccessAuthorsCitations

Showing 50 of 58 papers. Every paper with more than 270 citations is listed.

Most cited papers, sortable by citations and release date
#	Paper
1	SOAPnuke: a MapReduce acceleration-supported software for integrated quality control and preprocessing of high-throughput sequencing data Yuxin Chen, Yongsheng Chen, Chunmei Shi et al. · GigaScience Open access	4 Dec 2017	2,666
2	Association of reactive oxygen species levels and radioresistance in cancer stem cells Maximilian Diehn et al. · Nature Open access	5 Feb 2009	2,565
3	Mesenchymal stem cell perspective: cell biology to clinical progress Mark F. Pittenger, Dennis E. Discher, Bruno Péault et al. · npj Regenerative Medicine Open access	2 Dec 2019	2,083
4	A Randomized, Double-Blind, Placebo-Controlled, Dose-Escalation Study of Intravenous Adult Human Mesenchymal Stem Cells (Prochymal) After Acute Myocardial Infarction Joshua M. Hare, Jay H. Traverse, Timothy D. Henry et al. · Journal of the American College of Cardiology Open access	Dec 2009	1,359
5	Comparison of Allogeneic vs Autologous Bone Marrow–Derived Mesenchymal Stem Cells Delivered by Transendocardial Injection in Patients With Ischemic Cardiomyopathy Joshua M. Hare et al. · JAMA Open access	5 Nov 2012	1,197
6	Origin of endothelial progenitors in human postnatal bone marrow Morayma Reyes, Arkadiusz Zbigniew Dudek, Balkrishna Jahagirdar et al. · Journal of Clinical Investigation Open access	Feb 2002	1,108
7	Neurogenesis in the Adult Hippocampus Gerd Kempermann, Hongjun Song, Fred H. Gage · Cold Spring Harbor Perspectives in Biology Open access	Sep 2015	1,072
8	Multipotent adult progenitor cells from bone marrow differentiate into functional hepatocyte-like cells Robert E. Schwartz, Morayma Reyes, Lisa Koodie et al. · Journal of Clinical Investigation Open access	15 May 2002	1,034
9	Mesenchymal Stem Cells Adam R. Williams, Joshua M. Hare · Circulation Research Open access	29 Sep 2011	909
10	Multipotent progenitor cells can be isolated from postnatal murine bone marrow, muscle, and brain Yuehua Jiang, Ben Vaessen, Todd R. Lenvik et al. · Experimental Hematology Open access	Aug 2002	869
11	FGF stimulation of the Erk1/2 signalling cascade triggers transition of pluripotent embryonic stem cells from self-renewal to lineage commitment Tilo Kunath, Marc K. Saba-El-Leil, Marwa Almousailleakh et al. · Development Open access	27 Jul 2007	822
12	Brentuximab vedotin as consolidation therapy after autologous stem-cell transplantation in patients with Hodgkin's lymphoma at risk of relapse or progression (AETHERA): a randomised, double-blind, placebo-controlled, phase 3 trial Craig H. Moskowitz, Auayporn P. Nademanee, Tamás Masszi et al. · The Lancet Open access	28 Mar 2015	741
13	Mesenchymal Stem Cell Exosomes Induce Proliferation and Migration of Normal and Chronic Wound Fibroblasts, and Enhance Angiogenesis In Vitro Arsalan Shabbir, Audrey Cox, Luis Rodriguez-Menocal et al. · Stem Cells and Development Open access	13 Apr 2015	739
14	Matrices and scaffolds for delivery of bioactive molecules in bone and cartilage tissue engineering Soo‐Hong Lee, Heungsoo Shin · Advanced Drug Delivery Reviews Review	17 Apr 2007	708
15	Deletion of Tet2 in mice leads to dysregulated hematopoietic stem cells and subsequent development of myeloid malignancies Zhe Li, Xiaoqiang Cai, Chen‐Leng Cai et al. · Blood Open access	30 Jul 2011	676
16	Classification and Personalized Prognosis in Myeloproliferative Neoplasms Jacob Grinfeld et al. · New England Journal of Medicine Open access	10 Oct 2018	641
17	Effect of Mutation Order on Myeloproliferative Neoplasms Christina A. Ortmann et al. · New England Journal of Medicine Open access	11 Feb 2015	596
18	Allogeneic mesenchymal stem cells restore cardiac function in chronic ischemic cardiomyopathy via trilineage differentiating capacity Henry C. Quevedo, Konstantinos E. Hatzistergos, Behzad N. Oskouei et al. · Proceedings of the National Academy of Sciences Open access	5 Aug 2009	584
19	Transendocardial Mesenchymal Stem Cells and Mononuclear Bone Marrow Cells for Ischemic Cardiomyopathy Alan W. Heldman et al. · JAMA Open access	18 Nov 2013	573
20	Activation of Cardiac Fibroblast Growth Factor Receptor 4 Causes Left Ventricular Hypertrophy Alexander Grabner et al. · Cell Metabolism Open access	3 Oct 2015	545
21	Role of Inflammation in Muscle Homeostasis and Myogenesis Domiziana Costamagna, Paola Costelli, Maurilio Sampaolesi et al. · Mediators of Inflammation Open access	2015	540
22	Self-renewal of teratocarcinoma and embryonic stem cells Ian Chambers, Austin G Smith · Oncogene	20 Sep 2004	537
23	Single-cell analysis reveals new evolutionary complexity in uveal melanoma Michael A. Durante, Daniel A. Rodriguez, Stefan Kurtenbach et al. · Nature Communications Open access	24 Jan 2020	500
24	The Nature of Embryonic Stem Cells Graziano Martello, Austin G Smith · Annual Review of Cell and Developmental Biology ReviewOpen access	6 Oct 2014	463
25	Chronic Subdural Hematoma Management Saleh A. Almenawer, Forough Farrokhyar, Chris Joon Ho Hong et al. · Annals of Surgery	7 Oct 2013	459
26	Proline metabolism supports metastasis formation and could be inhibited to selectively target metastasizing cancer cells Ilaria Elia, Dorien Broekaert, Stefan Christen et al. · Nature Communications Open access	11 May 2017	442
27	Use of Mesenchymal Stem Cells for Therapy of Cardiac Disease Vasileios Karantalis, Joshua M. Hare · Circulation Research Open access	9 Apr 2015	432
28	Anti-inflammatory mechanism of intravascular neural stem cell transplantation in haemorrhagic stroke Soon‐Tae Lee, Kon Chu, Keun‐Hwa Jung et al. · Brain	21 Dec 2007	424
29	Targeting Epigenetic Readers in Cancer Mark A. Dawson, Tony Kouzarides, Brian J.P. Huntly · New England Journal of Medicine	15 Aug 2012	398
30	Development of Defective and Persistent Sendai Virus Vector Ken Nishimura, Masayuki Sano, Manami Ohtaka et al. · Journal of Biological Chemistry Open access	8 Dec 2010	375
31	Autologous Mesenchymal Stem Cells Produce Concordant Improvements in Regional Function, Tissue Perfusion, and Fibrotic Burden When Administered to Patients Undergoing Coronary Artery Bypass Grafting Vasileios Karantalis et al. · Circulation Research Open access	25 Feb 2014	355
32	Mesenchymal stem cells: the fibroblasts' new clothes? Muzlifah A. Haniffa, Matthew P. Collin, Christopher Dominic Buckley et al. · Haematologica Open access	23 Dec 2008	351
33	Mesenchymal Stem Cell-Based Therapy for Cardiovascular Disease: Progress and Challenges Luiza Bagno, Konstantinos E. Hatzistergos, Wayne Balkan et al. · Molecular Therapy Open access	25 May 2018	347
34	Molecular Coupling of Xist Regulation and Pluripotency Pablo Navarro, Ian Chambers, Violetta Karwacki-Neisius et al. · Science	18 Sep 2008	341
35	Defining early lineage specification of human embryonic stem cells by the orchestrated balance of canonical Wnt/β-catenin, Activin/Nodal and BMP signaling Tomoyuki Sumi, Norihiro Tsuneyoshi, Norio Nakatsuji et al. · Development	30 Jul 2008	336
36	The multifunctional role of EKLF/KLF1 during erythropoiesis Mirosława Siatecka, James J. Bieker · Blood Open access	26 May 2011	334
37	Foxo3 is required for the regulation of oxidative stress in erythropoiesis Dragan Marinković, Xin Zhang, Safak Yalcin et al. · Journal of Clinical Investigation Open access	Aug 2007	325
38	Induced pluripotent stem cell models of the genomic imprinting disorders Angelman and Prader–Willi syndromes Stormy J. Chamberlain, Pin-Fang Chen, Khong Y. Ng et al. · Proceedings of the National Academy of Sciences Open access	27 Sep 2010	323
39	Intramyocardial Stem Cell Injection in Patients With Ischemic Cardiomyopathy Adam R. Williams, Barry H. Trachtenberg, Darcy L. DiFede Velazquez et al. · Circulation Research Open access	18 Mar 2011	319
40	Poly(ADP-ribose) polymerase-dependent energy depletion occurs through inhibition of glycolysis Shaida A. Andrabi, George K. E. Umanah, Calvin K.W. Chang et al. · Proceedings of the National Academy of Sciences Open access	Jul 2014	314
41	3D Printed Stem‐Cell Derived Neural Progenitors Generate Spinal Cord Scaffolds Daeha Joung, Vincent Truong, Colin C Neitzke et al. · Advanced Functional Materials Open access	9 Aug 2018	307
42	FXR inhibition may protect from SARS-CoV-2 infection by reducing ACE2 Teresa Brevini et al. · Nature Open access	5 Dec 2022	305
43	Systems-level dynamic analyses of fate change in murine embryonic stem cells Rong Lu, Florian Markowetz, Richard D. Unwin et al. · Nature Open access	17 Nov 2009	302
44	Epigenetic and in vivo comparison of diverse MSC sources reveals an endochondral signature for human hematopoietic niche formation Andreas J. Reinisch et al. · Blood Open access	19 Nov 2014	301
45	PRAME as an Independent Biomarker for Metastasis in Uveal Melanoma Matthew G. Field, Christina L. Decatur, Stefan Kurtenbach et al. · Clinical Cancer Research Open access	29 Feb 2016	299
46	NMD is essential for hematopoietic stem and progenitor cells and for eliminating by-products of programmed DNA rearrangements Joachim Lütken Weischenfeldt, Inge Damgaard, David Bryder et al. · Genes & Development Open access	15 May 2008	299
47	Transplantation of Genetically Corrected Human iPSC-Derived Progenitors in Mice with Limb-Girdle Muscular Dystrophy Francesco Saverio Tedesco et al. · Science Translational Medicine	27 Jun 2012	297
48	Site-specific gene correction of a point mutation in human iPS cells derived from an adult patient with sickle cell disease Jizhong Zou, Prashant Mali, Xiaosong Huang et al. · Blood Open access	Sep 2011	297
49	A Nucleolin-Targeted Multimodal Nanoparticle Imaging Probe for Tracking Cancer Cells Using an Aptamer Do Won Hwang, Hae Young Ko, Jung Hwan Lee et al. · Journal of Nuclear Medicine Open access	15 Dec 2009	294
50	Cyclooxygenase-2 inhibitor, celecoxib, inhibits the altered hippocampal neurogenesis with attenuation of spontaneous recurrent seizures following pilocarpine-induced status epilepticus Keun‐Hwa Jung, Kon Chu, Soon‐Tae Lee et al. · Neurobiology of Disease Open access	25 Jul 2006	294

Citations are OpenAlex's own counts, from its 2026-09-23 snapshot, so the ranking can differ from Google Scholar or Web of Science. A paper is listed for an institution when any of its authors gave it as an affiliation; retracted papers and papers whose citation count cannot be traced to citing works are left out, and a preprint and the article it became are shown once. Release dates are OpenAlex's: where a source gave only a month or a year, that is what is shown. How the lists are chosen.