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Most cited papers from Open Targets

What are the most cited papers from Open Targets?

The most cited paper from Open Targets is "COSMIC: the Catalogue Of Somatic Mutations In Cancer" (John G. Tate et al., 2018), with 5,379 citations. Next come "The NHGRI-EBI GWAS Catalog of published genome-wide association studies, targeted arrays and summary statistics 2019" (4,675) and "Applications of machine learning in drug discovery and development" (3,274).

Showing 50 of 60 papers. Every paper with more than 135 citations is listed.

Most cited papers, sortable by citations and release date
#Paper
1 COSMIC: the Catalogue Of Somatic Mutations In Cancer John G. Tate et al. · Nucleic Acids Research Open access 11 Oct 2018 5,379
2 The NHGRI-EBI GWAS Catalog of published genome-wide association studies, targeted arrays and summary statistics 2019 Annalisa Buniello et al. · Nucleic Acids Research Open access 25 Oct 2018 4,675
3 Applications of machine learning in drug discovery and development Jessica J. Vamathevan, Dominic A. Clark, Paul Czodrowski et al. · Nature Reviews Drug Discovery ReviewOpen access 11 Apr 2019 3,274
4 The Reactome Pathway Knowledgebase Antonio Fabregat et al. · Nucleic Acids Research Open access 26 Oct 2017 3,234
5 The reactome pathway knowledgebase 2022 Marc E. Gillespie et al. · Nucleic Acids Research Open access 13 Oct 2021 2,621
6 ChEMBL: towards direct deposition of bioassay data David Méndez et al. · Nucleic Acids Research Open access 18 Oct 2018 2,540
7 The ChEMBL database in 2017 Anna Gaulton, Anne Hersey, Michał Nowotka et al. · Nucleic Acids Research Open access 31 Oct 2016 2,483
8 The reactome pathway knowledgebase Bijay Jassal et al. · Nucleic Acids Research Open access 21 Oct 2019 2,384
9 Selecting Therapeutic Targets in Inflammatory Bowel Disease (STRIDE): Determining Therapeutic Goals for Treat-to-Target Laurent Peyrin‐Biroulet et al. · The American Journal of Gastroenterology Open access 25 Aug 2015 1,861
10 The NHGRI-EBI GWAS Catalog: knowledgebase and deposition resource Elliot Sollis et al. · Nucleic Acids Research Open access 20 Oct 2022 1,820
11 The COSMIC Cancer Gene Census: describing genetic dysfunction across all human cancers Zbysław Sońdka, Sally Bamford, Charlotte G. Cole et al. · Nature reviews. Cancer ReviewOpen access 6 Oct 2018 1,800
12 The Reactome Pathway Knowledgebase 2024 Marija Orlic-Milacic et al. · Nucleic Acids Research Open access 20 Oct 2023 1,522
13 Prioritization of cancer therapeutic targets using CRISPR–Cas9 screens Fiona M. Behan et al. · Nature Open access 10 Apr 2019 1,479
14 Benchmark and integration of resources for the estimation of human transcription factor activities Luz García‐Alonso, Christian H. Holland, Mahmoud M. Ibrahim et al. · Genome Research Open access 24 Jul 2019 1,246
15 Mapping the human genetic architecture of COVID-19 COVID-19 Host Genetics Initiative et al. · Nature Open access3,896 authors 8 Jul 2021 1,130
16 A cellular census of human lungs identifies novel cell states in health and in asthma Felipe A. Vieira Braga et al. · Nature Medicine Open access 17 Jun 2019 991
17 Reactome pathway analysis: a high-performance in-memory approach Antonio Fabregat, Konstantinos Sidiropoulos, Guilherme Viteri et al. · BMC Bioinformatics Open access Mar 2017 945
18 Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms David Ezra Gordon et al. · Science Open access309 authors 15 Oct 2020 819
19 Open Targets Genetics: systematic identification of trait-associated genes using large-scale genetics and functional genomics Maya Ghoussaini et al. · Nucleic Acids Research Open access 17 Sep 2020 717
20 An open approach to systematically prioritize causal variants and genes at all published human GWAS trait-associated loci Edward Mountjoy, Ellen M. Schmidt, Miguel Carmona et al. · Nature Genetics Open access 28 Oct 2021 658
21 Fine-mapping inflammatory bowel disease loci to single-variant resolution Hailiang Huang et al. · Nature Open access 28 Jun 2017 653
22 From GWAS to Function: Using Functional Genomics to Identify the Mechanisms Underlying Complex Diseases Eddie Cano-Gamez, Gosia Trynka · Frontiers in Genetics Open access 13 May 2020 635
23 Open Targets Platform: supporting systematic drug–target identification and prioritisation David Ochoa et al. · Nucleic Acids Research Open access 11 Nov 2020 577
24 Genome-wide meta-analysis, fine-mapping and integrative prioritization implicate new Alzheimer’s disease risk genes Jeremy Schwartzentruber, Sarah Cooper, Jimmy Z. Liu et al. · Nature Genetics Open access 15 Feb 2021 572
25 Open Targets: a platform for therapeutic target identification and validation Gautier Koscielny et al. · Nucleic Acids Research Open access 3 Nov 2016 553
26 Open Targets Platform: new developments and updates two years on Denise Carvalho‐Silva, Andrea Pierleoni, Miguel Pignatelli et al. · Nucleic Acids Research Open access 26 Oct 2018 537
27 Trans-ancestry genome-wide association meta-analysis of prostate cancer identifies new susceptibility loci and informs genetic risk prediction David V. Conti et al. · Nature Genetics ReviewOpen access231 authors 2021 511
28 A compendium of uniformly processed human gene expression and splicing quantitative trait loci Nurlan Kerimov, James D. Hayhurst, Kateryna Peikova et al. · Nature Genetics Open access Sep 2021 489
29 The next-generation Open Targets Platform: reimagined, redesigned, rebuilt David Ochoa et al. · Nucleic Acids Research Open access 27 Oct 2022 473
30 The NHGRI-EBI GWAS Catalog: standards for reusability, sustainability and diversity María Cerezo et al. · Nucleic Acids Research Open access 22 Oct 2024 409
31 Genetic predisposition to mosaic Y chromosome loss in blood Deborah J. Thompson et al. · Nature Open access 20 Nov 2019 361
32 Integrated cross-study datasets of genetic dependencies in cancer Clare Pacini, Joshua M. Dempster, Isabella Boyle et al. · Nature Communications Open access 12 Mar 2021 348
33 Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation Julie Jerber, Daniel D. Seaton, Anna S. E. Cuomo et al. · Nature Genetics Open access Mar 2021 346
34 Single-cell transcriptomics identifies an effectorness gradient shaping the response of CD4+ T cells to cytokines Kiki Cano-Gamez, Blagoje Soskic, Theodoros I. Roumeliotis et al. · Nature Communications Open access 14 Apr 2020 314
35 Reactome graph database: Efficient access to complex pathway data Antonio Fabregat, Florian Korninger, Guilherme Viteri et al. · PLoS Computational Biology Open access 29 Jan 2018 300
36 Agreement between two large pan-cancer CRISPR-Cas9 gene dependency data sets Joshua M. Dempster et al. · Nature Communications Open access 20 Dec 2019 287
37 Human genetics evidence supports two-thirds of the 2021 FDA-approved drugs David Ochoa, Mohd Anisul Karim, Maya Ghoussaini et al. · Nature Reviews Drug Discovery 8 Jul 2022 276
38 The PROTACtable genome Melanie Schneider, Chris J. Radoux, Andrew Hercules et al. · Nature Reviews Drug Discovery Review 20 Jul 2021 259
39 IBD risk loci are enriched in multigenic regulatory modules encompassing putative causative genes Yukihide Momozawa et al. · Nature Communications Open access195 authors 15 Jun 2018 256
40 Gene expression variability across cells and species shapes innate immunity Tzachi Hagai et al. · Nature Open access 23 Oct 2018 255
41 The single-cell eQTLGen consortium Monique G.P. van der Wijst, DH de Vries, Hilde E. Groot et al. · eLife Open access 9 Mar 2020 246
42 Reactome diagram viewer: data structures and strategies to boost performance Antonio Fabregat, Konstantinos Sidiropoulos, Guilherme Viteri et al. · Bioinformatics Open access 22 Nov 2017 238
43 A map of transcriptional heterogeneity and regulatory variation in human microglia Adam M. H. Young et al. · Nature Genetics Open access Jun 2021 237
44 Transcription Factor Activities Enhance Markers of Drug Sensitivity in Cancer Luz García‐Alonso, Francesco Iorio, Angela Matchan et al. · Cancer Research Open access 11 Dec 2017 237
45 Open Targets Platform: facilitating therapeutic hypotheses building in drug discovery Annalisa Buniello et al. · Nucleic Acids Research Open access 30 Oct 2024 214
46 Single-cell and spatial transcriptomics analysis of non-small cell lung cancer Marco De Zuani, Haoliang Xue, Jun Sung Park et al. · Nature Communications Open access 23 May 2024 206
47 Immune disease risk variants regulate gene expression dynamics during CD4+ T cell activation Blagoje Soskic, Kiki Cano-Gamez, Deborah J. Smyth et al. · Nature Genetics Open access 26 May 2022 191
48 Reactome enhanced pathway visualization Konstantinos Sidiropoulos, Guilherme Viteri, Cristoffer Sevilla et al. · Bioinformatics Open access 5 Jul 2017 189
49 The Gene Curation Coalition: A global effort to harmonize gene–disease evidence resources Marina T. DiStefano et al. · Genetics in Medicine Open access 4 May 2022 169
50 A Novel, Macrophage Migration Inhibitory Factor Suicide Substrate Inhibits Motility and Growth of Lung Cancer Cells Millicent G. Winner, Jason B. Meier, Swen Zierow et al. · Cancer Research Open access 14 Sep 2008 168

Citations are OpenAlex's own counts, from its 2026-09-23 snapshot, so the ranking can differ from Google Scholar or Web of Science. A paper is listed for an institution when any of its authors gave it as an affiliation; retracted papers and papers whose citation count cannot be traced to citing works are left out, and a preprint and the article it became are shown once. Release dates are OpenAlex's: where a source gave only a month or a year, that is what is shown. How the lists are chosen.