| 1 | Arish UniversityAl ‘Arīsh |
#1,467 | 16.8 | 10.0% | 245 |
| 2 | Central Laboratory for Agricultural ClimateGiza |
#1,564 | 16.1 | 10.2% | 172 |
| 3 | Cairo UniversityGiza |
#1,760 | 14.7 | 11.4% | 2,993 |
| 4 | Agricultural Research CenterGiza |
#1,868 | 14.1 | 6.2% | 2,876 |
| 5 | City of Scientific Research and Technological ApplicationsAlexandria |
#1,993 | 13.3 | 19.0% | 240 |
| 6 | Egypt Nanotechnology CenterCairo |
#2,104 | 12.7 | 16.1% | 85 |
| 7 | Agricultural Genetic Engineering Research InstituteGiza |
#2,393 | 11.2 | 7.3% | 323 |
| 8 | Damanhour UniversityDamanhur |
#2,472 | 10.9 | 11.7% | 438 |
| 9 | National Institute of Oceanography and FisheriesAlexandria |
#2,512 | 10.7 | 14.2% | 238 |
| 10 | Desert Research CenterCairo |
#2,543 | 10.5 | 7.3% | 450 |
| 11 | Kafrelsheikh UniversityKafr ash Shaykh |
#2,555 | 10.5 | 14.6% | 657 |
| 12 | Mansoura UniversityAl Mansurah |
#2,624 | 10.2 | 9.5% | 1,665 |
| 13 | Assiut UniversityAsyut |
#2,670 | 10.0 | 7.4% | 1,256 |
| 14 | Badr University in CairoCairo |
#2,719 | 9.8 | 21.6% | 138 |
| 15 | Pharos University in AlexandriaAlexandria |
#2,749 | 9.6 | 15.8% | 90 |
| 16 | Heliopolis UniversityCairo |
#2,876 | 9.1 | 20.6% | 71 |
| 17 | National Research CentreGiza |
#2,903 | 9.0 | 11.1% | 1,957 |
| 18 | Ministry of Agriculture and Land ReclamationGiza |
#2,976 | 8.7 | 7.9% | 105 |
| 19 | October University of Modern Sciences and ArtsCairo |
#3,054 | 8.4 | 11.5% | 137 |
| 20 | University of Sadat CitySadat |
#3,063 | 8.4 | 9.4% | 326 |
| 21 | Minia UniversityMinya |
#3,093 | 8.3 | 9.0% | 612 |
| 22 | Ahram Canadian UniversityCairo |
#3,125 | 8.2 | 16.4% | 74 |
| 23 | Sinai UniversityCairo |
#3,298 | 7.6 | 20.3% | 86 |
| 24 | British University in EgyptCairo |
#3,357 | 7.4 | 11.8% | 93 |
| 25 | Zagazig UniversityZagazig |
#3,582 | 6.6 | 9.4% | 1,676 |
| 26 | Nile UniversityGiza |
#3,631 | 6.5 | 16.1% | 62 |
| 27 | Suez UniversitySuez |
#3,656 | 6.4 | 15.6% | 148 |
| 28 | National Organization for Drug Control and ResearchCairo |
#3,680 | 6.3 | 10.5% | 63 |
| 29 | South Valley UniversityQina |
#3,696 | 6.3 | 8.6% | 508 |
| 30 | Egyptian GovernmentCairo |
#3,720 | 6.2 | 11.6% | 70 |
| 31 | October 6 UniversityGiza |
#3,794 | 6.0 | 11.6% | 111 |
| 32 | Egyptian Russian UniversityCairo |
#3,877 | 5.7 | 16.6% | 131 |
| 33 | Central Laboratory For Agricultural Expert SystemsGiza |
#3,994 | 5.4 | 7.2% | 111 |
| 34 | American University in CairoCairo |
#4,084 | 5.1 | 17.6% | 132 |
| 35 | Ministry of Water Resources and IrrigationGiza |
#4,159 | 4.9 | 6.6% | 60 |
| 36 | Al-Azhar UniversityCairo |
#4,213 | 4.8 | 11.1% | 1,647 |
| 37 | Alexandria UniversityAlexandria |
#4,216 | 4.8 | 11.3% | 1,746 |
| 38 | Misr University for Science and TechnologyCairo |
#4,225 | 4.7 | 12.6% | 142 |
| 39 | Arab Academy for Science, Technology, and Maritime TransportAlexandria |
#4,304 | 4.5 | 13.0% | 77 |
| 40 | Damietta UniversityDamietta |
#4,377 | 4.3 | 9.3% | 353 |
| 41 | Beni-Suef UniversityBanī Suwayf |
#4,380 | 4.3 | 10.4% | 574 |
| 42 | Theodor Bilharz Research InstituteGiza |
#4,395 | 4.3 | 9.0% | 125 |
| 43 | Suez Canal UniversityIsmailia |
#4,435 | 4.2 | 8.2% | 819 |
| 44 | Future University in EgyptCairo |
#4,440 | 4.2 | 14.7% | 97 |
| 45 | Delta University for Science and TechnologyAl Mansurah |
#4,466 | 4.1 | 12.4% | 98 |
| 46 | Fayoum UniversityAl Fayyum |
#4,621 | 3.7 | 8.5% | 439 |
| 47 | National Water Research CenterCairo |
#4,695 | 3.5 | 9.8% | 164 |
| 48 | Aswan UniversityAswān |
#4,939 | 3.0 | 8.0% | 291 |
| 49 | Benha UniversityBanhā |
#4,950 | 2.9 | 5.8% | 1,261 |
| 50 | Zewail City of Science and TechnologyCairo |
#4,960 | 2.9 | 16.8% | 61 |
| 51 | German University in CairoCairo |
#5,043 | 2.7 | 10.7% | 93 |
| 52 | Helwan UniversityCairo |
#5,149 | 2.5 | 8.5% | 411 |
| 53 | Higher Institute of EngineeringCairo |
#5,194 | 2.4 | 12.8% | 63 |
| 54 | Port Said UniversityPort Said |
#5,314 | 2.1 | 8.9% | 141 |
| 55 | Tanta UniversityTanta |
#5,421 | 1.9 | 9.9% | 1,089 |
| 56 | Children Cancer HospitalCairo |
#5,782 | 116.0 | 5.8% | 64 |
| 57 | Ain Shams UniversityCairo |
#5,908 | 92.0 | 7.7% | 2,226 |
| 58 | Sohag UniversitySohag |
#6,039 | 67.0 | 5.5% | 486 |
| 59 | Menoufia UniversityShibīn al Kawm |
#6,196 | 37.0 | 5.9% | 840 |
| 60 | Egyptian Atomic Energy AuthorityCairo |
#6,286 | 21.0 | 7.5% | 296 |