| 1 | Academia SinicaTaipei |
#267 | 36.2 | 9.9% | 956 |
| 2 | National Taiwan UniversityTaipei |
#426 | 30.9 | 7.9% | 1,861 |
| 3 | National Yang Ming Chiao Tung UniversityHsinchu |
#756 | 24.4 | 8.4% | 861 |
| 4 | National Chung Hsing UniversityTaichung |
#913 | 22.2 | 8.2% | 705 |
| 5 | National Cheng Kung UniversityTainan City |
#921 | 22.1 | 8.2% | 843 |
| 6 | China Medical UniversityTaichung |
#992 | 21.3 | 11.2% | 612 |
| 7 | National Tsing Hua UniversityHsinchu |
#1,036 | 20.8 | 8.0% | 388 |
| 8 | Taipei Medical UniversityTaipei |
#1,190 | 19.2 | 10.6% | 883 |
| 9 | Kaohsiung Medical UniversityKaohsiung City |
#1,524 | 16.4 | 6.8% | 608 |
| 10 | Chang Gung Memorial HospitalTaipei |
#1,556 | 16.1 | 8.6% | 466 |
| 11 | China Medical University HospitalTaichung |
#1,565 | 16.1 | 10.7% | 311 |
| 12 | Asia UniversityTaichung |
#1,699 | 15.1 | 11.2% | 186 |
| 13 | National Health Research InstitutesHsinchu |
#1,721 | 15.0 | 10.0% | 196 |
| 14 | Ministry of EducationTaipei |
#1,826 | 14.3 | 18.4% | 62 |
| 15 | National Chiayi UniversityChiayi City |
#1,892 | 13.9 | 5.4% | 142 |
| 16 | Chang Gung UniversityTaoyuan City |
#2,053 | 13.0 | 8.3% | 469 |
| 17 | National Defense Medical CenterTaipei |
#2,180 | 12.3 | 8.0% | 220 |
| 18 | National Sun Yat-sen UniversityKaohsiung City |
#2,238 | 12.0 | 6.8% | 270 |
| 19 | Taipei Veterans General HospitalTaipei |
#2,310 | 11.6 | 9.1% | 280 |
| 20 | National Taiwan Normal UniversityTaipei |
#2,388 | 11.2 | 7.1% | 172 |
| 21 | Animal Health Research InstituteTaipei |
#2,548 | 10.5 | 6.8% | 297 |
| 22 | National Taipei UniversityTaipei |
#2,740 | 9.7 | 7.8% | 88 |
| 23 | National Kaohsiung Marine UniversityKaohsiung City |
#2,798 | 9.4 | 14.5% | 65 |
| 24 | World Vegetable CenterShanhua |
#2,807 | 9.4 | 18.1% | 82 |
| 25 | National Taiwan Ocean UniversityKeelung |
#2,989 | 8.7 | 6.4% | 255 |
| 26 | Chang Gung University of Science and TechnologyTaoyuan District |
#3,026 | 8.6 | 9.6% | 86 |
| 27 | Taiwan Forestry Research InstituteTaipei |
#3,058 | 8.4 | 4.3% | 67 |
| 28 | Tunghai UniversityTaichung |
#3,153 | 8.1 | 8.9% | 78 |
| 29 | National Taiwan University of Science and TechnologyTaipei |
#3,363 | 7.3 | 10.3% | 166 |
| 30 | I-Shou UniversityKaohsiung City |
#3,370 | 7.3 | 7.2% | 162 |
| 31 | Taiwan Centers for Disease ControlTaipei |
#3,416 | 7.2 | 7.4% | 62 |
| 32 | Soochow UniversityTaipei |
#3,453 | 7.1 | 6.5% | 60 |
| 33 | National Taipei University of TechnologyTaipei |
#3,677 | 6.3 | 9.2% | 143 |
| 34 | National Central UniversityTaoyuan City |
#3,786 | 6.0 | 9.5% | 155 |
| 35 | Council of AgricultureTaipei |
#3,820 | 5.9 | 9.6% | 66 |
| 36 | Chung Shan Medical UniversityTaichung |
#4,080 | 5.1 | 7.2% | 340 |
| 37 | Chi Mei Medical CenterTainan City |
#4,378 | 4.3 | 9.1% | 83 |
| 38 | Ministry of Health and WelfareTaipei |
#4,398 | 4.3 | 7.2% | 99 |
| 39 | Fu Jen Catholic UniversityTaipei |
#4,399 | 4.3 | 8.3% | 194 |
| 40 | National Yunlin University of Science and TechnologyDouliu |
#4,530 | 4.0 | 11.5% | 73 |
| 41 | National Chung Cheng UniversityMinxiong |
#4,601 | 3.8 | 10.8% | 91 |
| 42 | National Ilan UniversityYilan |
#4,730 | 3.5 | 7.0% | 65 |
| 43 | Yuan Ze UniversityTaoyuan District |
#4,739 | 3.4 | 14.7% | 102 |
| 44 | Mackay Memorial HospitalHsinchu |
#4,748 | 3.4 | 5.9% | 111 |
| 45 | Taichung Veterans General HospitalTaichung |
#4,930 | 3.0 | 6.1% | 135 |
| 46 | Taipei Tzu Chi HospitalTaipei |
#5,056 | 2.7 | 7.3% | 78 |
| 47 | Kaohsiung Veterans General HospitalKaohsiung |
#5,064 | 2.7 | 7.3% | 77 |
| 48 | Tri-Service General HospitalTaipei |
#5,163 | 2.5 | 8.3% | 121 |
| 49 | Fooyin UniversityKaohsiung City |
#5,210 | 2.3 | 8.2% | 66 |
| 50 | Kaohsiung Chang Gung Memorial HospitalKaohsiung City |
#5,349 | 2.0 | 7.4% | 146 |
| 51 | National Pingtung University of Science and TechnologyPingtung City |
#5,413 | 1.9 | 9.9% | 354 |
| 52 | Far Eastern Memorial HospitalTaipei |
#5,449 | 1.8 | 7.3% | 65 |
| 53 | Mackay Medical UniversityTaipei |
#5,512 | 1.7 | 4.7% | 74 |
| 54 | National Chengchi UniversityTaipei |
#5,589 | 1.5 | 4.8% | 63 |
| 55 | Changhua Christian HospitalChanghua |
#5,724 | 128.0 | 6.7% | 66 |
| 56 | Chung Yuan Christian UniversityTaoyuan City |
#5,733 | 126.0 | 5.9% | 82 |
| 57 | Tzu Chi UniversityHualien City |
#6,046 | 65.0 | 5.8% | 191 |
| 58 | Tzu Chi FoundationHualien City |
#6,237 | 30.0 | 7.1% | 86 |