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Nonprofit · Somerville · United States

OpenBiome

openbiome.orgROR OpenAlex
Research works
64
▼ 83% vs 2018-21
Citations
1.4k
22.1 per fractional work
Top-10% rate
8.6%
all institutions 10.0%
Open access
82%
world 40%
International
10%
world 18%
OpenBiome

Not ranked overall: OpenBiome is under the volume floor below which an excellence rate is noise. Not ranked is not the same as ranked last.

Which fields of science does OpenBiome work in?

In 2022-now, 42% of research at OpenBiome is in Physical Sciences, 32% in Social Sciences. Its largest fields are Computer Science (37%), Neuroscience (14%), Decision Sciences (13%). It does 1.3× the world's share of Life Sciences.

Physical Sciences: 14 fractional works · 42.0% of its workComputer Science: 12 fractional works · 37.0% of its workArtificial Intelligence: 10 fractional works · 30.8% of its workComputer Networks and Communications: 1 fractional works · 3.1% of its workComputational Theory and Mathematics: 1 fractional works · 2.2% of its workSoftware: 0 fractional works · 1.0% of its workPhysics and Astronomy: 1 fractional works · 4.1% of its workAstronomy and Astrophysics: 1 fractional works · 4.1% of its workMaterials Science: 0 fractional works · 0.8% of its workMaterials Chemistry: 0 fractional works · 0.4% of its workPolymers and Plastics: 0 fractional works · 0.3% of its workSmaller subfields together: 0 fractional works · 0.0% of its workEngineering: 0 fractional works · 0.1% of its workSocial Sciences: 10 fractional works · 32.0% of its workDecision Sciences: 4 fractional works · 13.3% of its workInformation Systems and Management: 3 fractional works · 10.2% of its workGeneral Decision Sciences: 1 fractional works · 3.1% of its workPsychology: 4 fractional works · 12.3% of its workSocial Psychology: 4 fractional works · 12.3% of its workSocial Sciences: 2 fractional works · 6.4% of its workSociology and Political Science: 2 fractional works · 6.4% of its workLife Sciences: 6 fractional works · 19.6% of its workNeuroscience: 5 fractional works · 14.5% of its workCognitive Neuroscience: 5 fractional works · 14.4% of its workSmaller subfields together: 0 fractional works · 0.1% of its workBiochemistry, Genetics and Molecular Biology: 1 fractional works · 4.3% of its workMolecular Biology: 1 fractional works · 2.6% of its workGenetics: 0 fractional works · 1.0% of its workBiochemistry: 0 fractional works · 0.3% of its workEndocrinology: 0 fractional works · 0.3% of its workSmaller subfields together: 0 fractional works · 0.1% of its workAgricultural and Biological Sciences: 0 fractional works · 0.5% of its workPlant Science: 0 fractional works · 0.5% of its workImmunology and Microbiology: 0 fractional works · 0.3% of its workImmunology: 0 fractional works · 0.2% of its workSmaller subfields together: 0 fractional works · 0.1% of its workHealth Sciences: 2 fractional works · 6.4% of its workMedicine: 2 fractional works · 6.1% of its workCardiology and Cardiovascular Medicine: 1 fractional works · 2.1% of its workInfectious Diseases: 1 fractional works · 1.6% of its workOncology: 0 fractional works · 1.0% of its workOtorhinolaryngology: 0 fractional works · 0.5% of its workGastroenterology: 0 fractional works · 0.5% of its workEpidemiology: 0 fractional works · 0.2% of its workSmaller subfields together: 0 fractional works · 0.2% of its workNursing: 0 fractional works · 0.2% of its workNutrition and Dietetics: 0 fractional works · 0.2% of its workALL ITS WORKOpenBiome33fractional works, 2022-now
Life Sciences20%Physical Sciences42%Health Sciences6%Social Sciences32%

Each ring splits the one inside it: the four domains of science, their fields, their subfields. Size is fractional works in 2022-now. Every slice is a page; the interactive view zooms down to single topics and colours each by how much more of it this institution does than the world.

Its 4 domains and 13 fields, with their numbers
    1. Computer Science1237.0%
    2. Physics and Astronomy14.1%
    3. Materials Science00.8%
    4. Engineering00.1%
    1. Decision Sciences413.3%
    2. Psychology412.3%
    3. Social Sciences26.4%
    1. Neuroscience514.5%
    2. Biochemistry, Genetics and Molecular Biology14.3%
    3. Agricultural and Biological Sciences00.5%
    4. Immunology and Microbiology00.3%
    1. Medicine26.1%
    2. Nursing00.2%
All of science, and how each field's share has moved since 1950: the Science domain explorer

Field profile

Location quotient across every field it publishes in: outside the ring is more than an institution of this size would be expected to publish, inside it is less.

Agricultural and Biological Sciences: 0.11× its world share, 0 worksAgricultural and Bio…Biochemistry, Genetics and Molecular Biology: 0.81× its world share, 1 worksBiochemistry, Geneti…Immunology and Microbiology: 0.31× its world share, 0 worksImmunology and Micro…Neuroscience: 8.90× its world share, 5 worksNeuroscienceComputer Science: 4.76× its world share, 12 worksComputer ScienceEngineering: 0.01× its world share, 0 worksEngineeringMaterials Science: 0.23× its world share, 0 worksMaterials SciencePhysics and Astronomy: 1.84× its world share, 1 worksPhysics and AstronomyMedicine: 0.32× its world share, 2 worksMedicineNursing: 0.52× its world share, 0 worksNursingDecision Sciences: 13.79× its world share, 4 worksDecision SciencesPsychology: 4.04× its world share, 4 worksPsychologySocial Sciences: 0.51× its world share, 2 worksSocial Sciences1×world share
more than its size predictsabout as predictedless

Rings at 0.5×, 1× and 2×. Widest outward: Decision Sciences, 13.8×. Every wedge is a field page.

All 13 fields, with their numbers
  1. Decision Sciences13.79×4 works
  2. Neuroscience8.90×5 works
  3. Computer Science4.76×12 works
  4. Psychology4.04×4 works
  5. Physics and Astronomy1.84×1 works
  6. Biochemistry, Genetics and Molecular Biology0.81×1 works
  7. Nursing0.52×0 works
  8. Social Sciences0.51×2 works
  9. Medicine0.32×2 works
  10. Immunology and Microbiology0.31×0 works
  11. Materials Science0.23×0 works
  12. Agricultural and Biological Sciences0.11×0 works
  13. Engineering0.01×0 works

Who are the top researchers at OpenBiome?

Ranked on the quality score, Zain Kassam, Majdi Osman and Shrish Budree lead among researchers whose main affiliation is OpenBiome.

  1. 1 Zain Kassam United States · #312,129 worldwide 9k citations · 225 works
  2. 2 Majdi Osman United States · #550,072 worldwide 36k citations · 77 works
  3. 3 Shrish Budree United States · #761,663 worldwide 1.2k citations · 55 works
  4. 4 Bharat Ramakrishna United States · #1,141,637 worldwide 418 citations · 18 works
  5. 5 Ryan J. Elliott United States · #1,710,947 worldwide 597 citations · 23 works
  6. 6 Pratik Bhikhubhai Panchal United States · #1,819,766 worldwide 551 citations · 46 works
  7. 7 Wing Fei Wong United States · #1,927,645 worldwide 651 citations · 22 works
  8. 8 Nancy E. Dubois United States · #2,267,168 worldwide 630 citations · 31 works
  9. 9 Gina M. Mendolia United States · #3,194,497 worldwide 198 citations · 15 works
All ranked researchers at OpenBiome

What are the most cited papers from OpenBiome?

The most cited paper from OpenBiome is "Fecal microbiota transplant from a rational stool donor improves hepatic encephalopathy: A randomized clinical trial" (Jasmohan Singh Bajaj, Zain Kassam, Andrew Fagan et al., 2017), with 638 citations. Next come "International consensus conference on stool banking for faecal microbiota transplantation in clinical practice" (510) and "A library of human gut bacterial isolates paired with longitudinal multiomics data enables mechanistic microbiome research" (435).

Most cited papers
#PaperReleasedCitations
1 Fecal microbiota transplant from a rational stool donor improves hepatic encephalopathy: A randomized clinical trial Jasmohan Singh Bajaj, Zain Kassam, Andrew Fagan et al. · Hepatology Open access 6 Jun 2017 638
2 International consensus conference on stool banking for faecal microbiota transplantation in clinical practice Giovanni Cammarota et al. · Gut Open access 28 Sep 2019 510
3 A library of human gut bacterial isolates paired with longitudinal multiomics data enables mechanistic microbiome research Mathilde Poyet et al. · Nature Medicine Sep 2019 435
4 OpenFold: retraining AlphaFold2 yields new insights into its learning mechanisms and capacity for generalization Gustaf Ahdritz et al. · Nature Methods Open access 14 May 2024 331
5 Effects of Fecal Microbiota Transplantation With Oral Capsules in Obese Patients Jessica R. Allegretti, Zain Kassam, Benjamin Harvey Mullish et al. · Clinical Gastroenterology and Hepatology Open access 10 Jul 2019 319
All 60 most cited papers, with filters and sorting

Which keywords describe research at OpenBiome?

By fractional works in 2022-now, weighted toward what it does more of than the world: Cognitive Load, Trust, Interpretable Models, Machine Learning Interpretability, Security, Security Policies, Side-Channel Attacks and Automation.

▲ more of its work than of the world's◆ about the world's share▼ less than the world's

Size is fractional works in 2022-now in the topics tagged with each word; colour is the word's share of this institution's work against its share of the world's. The 35 words are chosen for being large and distinctive. Each links to the topic it comes from most.

All 35 words, with their numbers
  1. Cognitive Load5▲ 300×2 topics
  2. Trust5▲ 52×2 topics
  3. Interpretable Models4▲ 245×1 topic
  4. Machine Learning Interpretability4▲ 245×1 topic
  5. Security4▲ 17×2 topics
  6. Security Policies3▲ 440×1 topic
  7. Side-Channel Attacks3▲ 181×1 topic
  8. Automation3▲ 116×1 topic
  9. Driver Distraction3▲ 207×1 topic
  10. Multi-Agent Systems3▲ 43×2 topics
  11. Access Control2▲ 619×1 topic
  12. Information Overload2▲ 737×1 topic
  13. Interruptions2▲ 737×1 topic
  14. Reputation2▲ 198×1 topic
  15. Social Cognition2▲ 34×2 topics
  16. Deep Learning2▲ 1.63×2 topics
  17. Adversarial Examples2▲ 92×1 topic
  18. Machine Learning2▲ 1.59×3 topics
  19. Robustness2▲ 92×1 topic
  20. Bioinformatics1▲ 36×2 topics
  21. Neural Processing1▲ 70×2 topics
  22. Astrobiology1▲ 129×1 topic
  23. Embodied Cognition1▲ 271×1 topic
  24. Extraterrestrial Life1▲ 188×1 topic
  25. Perceptual Learning1▲ 82×1 topic
  26. Predictive Brain Theory1▲ 271×1 topic
  27. Reproducibility1▲ 104×1 topic
  28. Scientific Workflows1▲ 104×1 topic
  29. Visual Perception1▲ 171×1 topic
  30. Artificial Intelligence1▲ 2.2×2 topics
  31. Decision Making1▲ 11×1 topic
  32. Human-Robot Interaction1▲ 26×2 topics
  33. Log Analysis1▲ 71×1 topic
  34. Performance Prediction1▲ 44×1 topic
  35. Risk Aversion1▲ 168×1 topic

Which research topics does OpenBiome publish most on?

By volume in 2022-now: Explainable Artificial Intelligence (XAI), Security and Verification in Computing, Human-Automation Interaction and Safety and Access Control and Trust.

Explainable Artificial I…4Explainable Artificial Intelligence (XAI): 4 fractional worksSecurity and Verification in Computing: 3 fractional worksHuman-Automation Interac…3Human-Automation Interaction and Safety: 3 fractional worksAccess Control and Trust2Access Control and Trust: 2 fractional worksPersonal Information Management and User Behavior: 2 fractional worksAdversarial Robustness in Machine Learning: 2 fractional worksScientific Computing and…1Scientific Computing and Data Management: 1 fractional worksEmbodied and Extended Cognition: 1 fractional worksVisual perception and processing mechanisms: 1 fractional worksSpace Science and Extraterrestrial Life: 1 fractional works
Artificial IntelligenceSocial PsychologySociology and Political ScienceInformation Systems and Management2 others

Area is fractional works; colour is the subfield each topic belongs to.

  1. 1 Explainable Artificial Intelligence (XAI) Artificial Intelligence 4 works
  2. 2 Security and Verification in Computing Artificial Intelligence 3 works
  3. 3 Human-Automation Interaction and Safety Social Psychology 3 works
  4. 4 Access Control and Trust Sociology and Political Science 2 works
  5. 5 Personal Information Management and User Behavior Information Systems and Management 2 works
  6. 6 Adversarial Robustness in Machine Learning Artificial Intelligence 2 works
  7. 7 Scientific Computing and Data Management Information Systems and Management 1 works
  8. 8 Embodied and Extended Cognition Cognitive Neuroscience 1 works
  9. 9 Visual perception and processing mechanisms Cognitive Neuroscience 1 works
  10. 10 Space Science and Extraterrestrial Life Astronomy and Astrophysics 1 works

How open and international is its research?

Against the world's own shares: the tick on each track. Both are shares of its output, so they sit on one scale and can be read against each other as well as against the world.

openly available82.3%not open17.7%

World: 40% of research is openly available.

with international co-authors10.1%domestic only89.9%

World: 18% is written across borders.

How has OpenBiome's research output changed?

Output in 2022-2025 was 83% lower than in 2018-2021.

still counting20052010201520202025
grewheldshrank

The same series as a ribbon: one cell per year, darker for more. The line above answers how much; this answers when.

Its share of all research

Growing output can still be a shrinking share: all of science grows. This is OpenBiome as a percentage of every work published that year, 0.000020% in 2024.

still counting0.00010%0.00020%OpenBiome0.0000058% in 202520102020

Fractional works of OpenBiome over all fractional works that year. How the balance of science has shifted.

Other research institutions in Somerville

All research institutions in Somerville

Research measures only: rankings here say nothing about teaching, admissions or student experience. Comparable institutions and collaboration partners have tabs of their own, above.

Discussion

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